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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
552
gene expression
437
target gene predictions
407
candidate regulatory elements
304
histone modifications
241
chromatin state
152
differential activity
138
binding sites
87
variant allelic effects
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
645
February, 2021
592
September, 2022
333
November, 2021
292
May, 2021
285
September, 2023
179
February, 2024
93
May, 2020
74
June, 2020
72
August, 2021
56
January, 2021
55
March, 2023
40
May, 2022
31
October, 2022
27
November, 2022
26
January, 2020
19
April, 2020
16
February, 2020
15
March, 2020
10
August, 2017
9
August, 2018
9
October, 2019
5
January, 2022
4
February, 2023
3
November, 2020
2
November, 2019
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1937
bed bed3+
664
tsv
422
bigWig
204
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2850
Homo sapiens
Biosample type
2537
tissue
2425
primary cell
2342
cell line
470
in vitro differentiated cells
4
stem cell
Organ
844
epithelium
327
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
52
embryo
50
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
39
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
mouth
4
nose
4
small intestine
4
spinal cord
3
gonad
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
thymus
Project
2203
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
2181
hg19
737
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
2895 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
15
2
86
1
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
2
+ See 443 more…
in vitro differentiated cells
neural progenitor cell
10
7
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
4
1
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 121 more…
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