Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
469
gene expression
307
candidate regulatory elements
248
target gene predictions
201
accessible chromatin
152
differential activity
120
histone modifications
90
binding sites
81
variant allelic effects
33
chromatin state
9
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
436
February, 2021
314
September, 2022
281
September, 2023
158
May, 2021
121
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
39
August, 2021
34
May, 2022
27
October, 2022
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
March, 2020
1
January, 2022
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2020
Available data
1061
bed bed3+
580
tsv
130
bigWig
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1682
Homo sapiens
Biosample type
1976
cell line
1916
tissue
1727
primary cell
399
in vitro differentiated cells
4
stem cell
Organ
601
epithelium
290
kidney
191
connective tissue
122
vasculature
103
pancreas
80
blood vessel
73
skin of body
35
musculature of body
penis
33
mammary gland
29
extraembryonic component
27
liver
25
artery
23
brain
21
lung
17
heart
16
embryo
15
eye
15
vein
12
bone element
12
bronchus
12
lymphatic vessel
11
bone marrow
9
blood
9
bodily fluid
8
prostate gland
7
placenta
5
esophagus
5
trachea
4
intestine
3
mouth
3
spinal cord
3
uterus
2
stomach
1
adipose tissue
1
adrenal gland
1
gonad
1
limb
1
pericardium
1
thyroid gland
Project
1371
AMP
281
KPMP
56
T1D
19
LungMap
Genome assembly (visualization)
1762
hg19
GRCh38
assembly!
GRCh38
organ_slims!
penis
BIOSAMPLE
TYPE
1727 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
CD8-positive, alpha-beta T cell
3
7
4
3
30
1
common myeloid progenitor, CD34-positive
27
14
monocyte
15
2
5
2
1
1
2
1
1
B cell
2
14
10
3
CD14-positive monocyte
8
19
+ See 381 more…
See all biosamples
Download