Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
257
accessible chromatin
209
histone modifications
168
candidate regulatory elements
152
differential activity
100
binding sites
100
target gene predictions
81
variant allelic effects
44
eQTL
37
chromatin state
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
September, 2022
456
February, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
935
bed bed3+
589
tsv
185
bigWig
108
txt
27
bed bed9+
15
bigBed narrowPeak
4
bed bed9
4
bigBed bed9
Organism
1604
Homo sapiens
Biosample type
1810
cell line
1649
primary cell
1275
tissue
365
in vitro differentiated cells
4
stem cell
Organ
559
epithelium
279
kidney
156
connective tissue
118
vasculature
104
pancreas
81
blood vessel
52
liver
39
skin of body
33
musculature of body
23
brain
23
penis
20
artery
19
mammary gland
14
vein
13
extraembryonic component
13
lung
12
heart
10
bone element
10
eye
9
blood
9
bodily fluid
9
bone marrow
8
bronchus
8
embryo
8
lymphatic vessel
5
placenta
5
trachea
4
intestine
4
prostate gland
3
esophagus
3
uterus
2
gonad
2
stomach
1
adipose tissue
1
adrenal gland
1
limb
1
mouth
1
pericardium
1
spinal cord
1
testis
1
thyroid gland
Project
1290
AMP
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
983
hg19
213
GRCh38
award.project!
ENCODE
month_released!
September, 2022
BIOSAMPLE
TYPE
1649 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
histone modifications
candidate regulatory elements
differential activity
binding sites
target gene predictions
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
86
1
2
4
2
1
1
CD8-positive, alpha-beta T cell
3
3
30
7
4
1
hepatocyte
13
7
4
1
1
2
endothelial cell
9
5
1
2
1
2
1
2
epithelial cell of proximal tubule
16
1
1
1
1
+ See 382 more…
See all biosamples
Download