Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
328
candidate regulatory elements
307
gene expression
261
target gene predictions
243
accessible chromatin
210
histone modifications
197
chromatin state
100
binding sites
81
variant allelic effects
44
eQTL
42
differential activity
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
456
February, 2021
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1243
bed bed3+
308
tsv
169
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1791
Homo sapiens
Biosample type
2647
tissue
2343
cell line
1836
primary cell
470
in vitro differentiated cells
4
stem cell
Organ
530
epithelium
213
connective tissue
166
kidney
125
vasculature
108
pancreas
90
skin of body
89
blood vessel
58
liver
41
penis
40
mammary gland
39
musculature of body
37
extraembryonic component
35
brain
24
artery
22
lung
21
heart
20
embryo
20
vein
19
eye
13
bone element
13
bronchus
12
bone marrow
10
prostate gland
9
blood
9
bodily fluid
8
lymphatic vessel
8
placenta
6
esophagus
5
trachea
4
intestine
4
mouth
4
spinal cord
3
uterus
2
gonad
2
stomach
1
adipose tissue
1
adrenal gland
1
limb
1
pericardium
1
testis
1
thyroid gland
Project
1777
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1451
hg19
374
GRCh38
BIOSAMPLE
TYPE
1836 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
differential activity
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
2
18
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
3
4
3
30
1
B cell
14
2
10
2
8
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 326 more…
See all biosamples
Download