Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
482
accessible chromatin
368
target gene predictions
322
candidate regulatory elements
210
histone modifications
98
binding sites
80
variant allelic effects
44
eQTL
41
gene expression
32
chromatin state
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
333
November, 2021
329
February, 2021
323
September, 2022
187
May, 2021
117
February, 2024
84
May, 2020
56
January, 2021
52
June, 2020
40
May, 2022
37
January, 2022
30
October, 2022
21
January, 2020
19
April, 2020
17
August, 2021
16
February, 2020
9
August, 2018
9
November, 2022
5
August, 2017
5
October, 2019
4
February, 2023
4
March, 2020
2
November, 2020
1
June, 2021
Available data
1580
bed bed3+
tsv
409
bigWig
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1655
Homo sapiens
Biosample type
2149
cell line
1954
tissue
1700
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
470
epithelium
220
connective tissue
108
vasculature
83
skin of body
79
pancreas
75
blood vessel
62
kidney
47
musculature of body
43
liver
39
mammary gland
35
penis
32
extraembryonic component
31
brain
30
lung
28
heart
23
intestine
22
artery
20
eye
18
embryo
vein
14
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1289
AMP
333
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1624
hg19
533
GRCh38
files.file_type!
bed bed9
tsv
organ_slims!
vein
BIOSAMPLE
TYPE
1700 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
eQTL
gene expression
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
1
common myeloid progenitor, CD34-positive
14
27
endothelial cell
15
7
1
2
2
1
1
2
B cell
6
10
14
+ See 343 more…
See all biosamples
Download