Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
accessible chromatin
369
target gene predictions
324
candidate regulatory elements
209
histone modifications
98
binding sites
75
variant allelic effects
11
caQTL
6
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
331
November, 2021
329
February, 2021
323
September, 2022
179
May, 2021
102
February, 2024
81
May, 2020
56
January, 2021
51
June, 2020
31
October, 2022
21
January, 2020
18
April, 2020
16
August, 2021
13
May, 2022
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1581
bed bed3+
589
tsv
408
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1536
Homo sapiens
Biosample type
2125
cell line
1850
tissue
1581
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
445
epithelium
208
connective tissue
104
vasculature
83
skin of body
71
blood vessel
70
pancreas
52
kidney
41
musculature of body
39
mammary gland
38
liver
35
penis
32
extraembryonic component
31
brain
30
lung
24
heart
23
intestine
20
artery
20
eye
18
embryo
15
vein
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1173
AMP
331
ENCODE
59
T1D
18
LungMap
Genome assembly (visualization)
1575
hg19
497
GRCh38
organ_slims!
bronchus
BIOSAMPLE
TYPE
1581 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
14
endothelial cell
15
7
1
2
2
2
1
+ See 326 more…
See all biosamples
Download