Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
462
accessible chromatin
370
target gene predictions
356
gene expression
195
chromatin state
161
candidate regulatory elements
152
differential activity
118
histone modifications
80
variant allelic effects
44
eQTL
29
binding sites
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1240
bed bed3+
467
tsv
385
bigWig
162
bed bed9
27
bed bed9+
25
txt
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1945
Homo sapiens
Biosample type
1990
primary cell
1949
tissue
1047
cell line
278
in vitro differentiated cells
4
stem cell
Organ
642
epithelium
220
connective tissue
209
kidney
132
vasculature
119
pancreas
90
blood vessel
72
skin of body
54
liver
40
musculature of body
34
mammary gland
32
extraembryonic component
29
lung
25
heart
22
brain
22
intestine
22
penis
21
artery
17
embryo
17
eye
15
lymphatic vessel
13
vein
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
7
placenta
6
large intestine
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
1298
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1446
hg19
683
GRCh38
month_released!
February, 2021
January, 2020
BIOSAMPLE
TYPE
1990 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
histone modifications
variant allelic effects
eQTL
binding sites
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
84
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
3
1
30
common myeloid progenitor, CD34-positive
14
13
13
B cell
6
10
2
8
9
endothelial cell
15
7
5
2
1
2
+ See 379 more…
See all biosamples
Download