Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
456
accessible chromatin
344
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
222
November, 2021
53
June, 2020
47
May, 2020
31
February, 2024
January, 2021
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2021
13
May, 2022
9
November, 2022
5
October, 2019
5
September, 2022
2
November, 2020
1
February, 2021
1
January, 2022
1
June, 2021
Available data
453
bed bed3+
366
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
411
Homo sapiens
Biosample type
456
primary cell
197
tissue
163
cell line
69
in vitro differentiated cells
Organ
149
epithelium
61
connective tissue
27
pancreas
25
vasculature
23
kidney
17
blood vessel
17
liver
17
musculature of body
11
intestine
9
brain
9
lung
7
eye
7
skin of body
6
adrenal gland
6
extraembryonic component
6
heart
5
mammary gland
5
stomach
4
artery
4
embryo
3
bronchus
3
large intestine
3
lymphatic vessel
3
placenta
2
esophagus
2
gonad
2
small intestine
2
uterus
2
vein
1
blood
1
bodily fluid
1
bone element
1
bone marrow
1
ovary
1
penis
1
thymus
1
thyroid gland
1
trachea
Project
222
ENCODE
214
AMP
19
LungMap
1
T1D
Genome assembly (visualization)
455
hg19
282
GRCh38
month_released!
January, 2021
BIOSAMPLE
TYPE
456 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
17
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
11
+ See 210 more…
See all biosamples
Download