Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
448
gene expression
413
accessible chromatin
338
target gene predictions
296
candidate regulatory elements
histone modifications
180
chromatin state
135
differential activity
84
binding sites
56
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
442
September, 2022
338
February, 2021
327
November, 2021
246
September, 2023
140
May, 2021
136
February, 2024
May, 2020
56
January, 2021
51
March, 2023
50
June, 2020
40
May, 2022
39
August, 2021
37
January, 2022
27
October, 2022
16
April, 2020
14
February, 2020
14
January, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1209
bed bed3+
546
tsv
343
bigWig
148
bed bed9
106
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2017
Homo sapiens
Biosample type
2427
tissue
2017
primary cell
1759
cell line
367
in vitro differentiated cells
4
stem cell
Organ
789
epithelium
303
kidney
266
connective tissue
vasculature
123
pancreas
107
blood vessel
96
skin of body
55
liver
46
musculature of body
45
mammary gland
39
penis
38
extraembryonic component
34
lung
30
heart
28
brain
26
artery
22
intestine
21
embryo
21
eye
18
vein
17
lymphatic vessel
15
bronchus
11
adrenal gland
11
stomach
10
bone element
10
bone marrow
10
esophagus
10
prostate gland
9
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1367
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
2
community
Genome assembly (visualization)
1403
hg19
573
GRCh38
month_released!
May, 2020
annotation_type!
histone modifications
organ_slims!
vasculature
BIOSAMPLE
TYPE
2017 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
common myeloid progenitor, CD34-positive
14
27
13
monocyte
15
16
1
1
4
2
1
1
endothelial cell
9
15
7
2
2
1
2
B cell
2
4
9
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 393 more…
See all biosamples
Download