Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
465
accessible chromatin
459
gene expression
365
target gene predictions
324
candidate regulatory elements
203
histone modifications
193
chromatin state
149
differential activity
91
binding sites
77
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
478
September, 2022
444
February, 2021
327
November, 2021
281
September, 2023
255
May, 2021
127
February, 2024
82
May, 2020
54
January, 2021
51
June, 2020
51
March, 2023
39
August, 2021
39
May, 2022
37
January, 2022
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
4
February, 2023
3
November, 2020
1
June, 2021
1
March, 2020
1
March, 2024
Available data
1546
bed bed3+
571
tsv
388
bigWig
161
bed bed9
108
txt
26
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2348
Homo sapiens
Biosample type
2594
tissue
2393
primary cell
2324
cell line
463
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1709
AMP
327
ENCODE
281
KPMP
57
T1D
19
LungMap
Genome assembly (visualization)
1750
hg19
669
GRCh38
organ_slims!
liver
bone marrow
BIOSAMPLE
TYPE
2393 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
1
2
+ See 440 more…
See all biosamples
Download