Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
468
accessible chromatin
341
target gene predictions
281
candidate regulatory elements
206
histone modifications
175
chromatin state
152
differential activity
92
binding sites
79
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
424
September, 2022
423
February, 2021
314
November, 2021
282
September, 2023
251
May, 2021
150
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
26
October, 2022
23
January, 2020
16
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
March, 2020
7
October, 2019
5
August, 2017
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1486
bed bed3+
591
tsv
396
bigWig
143
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2296
Homo sapiens
Biosample type
2446
tissue
2337
primary cell
2186
cell line
461
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
284
connective tissue
169
vasculature
126
pancreas
114
blood vessel
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
36
brain
lung
31
heart
29
artery
23
embryo
23
eye
23
intestine
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1669
AMP
314
ENCODE
281
KPMP
59
T1D
16
LungMap
2
community
Genome assembly (visualization)
1673
hg19
667
GRCh38
organ_slims!
lung
skin of body
BIOSAMPLE
TYPE
2341 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 430 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download