Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
473
gene expression
471
accessible chromatin
361
target gene predictions
315
candidate regulatory elements
207
histone modifications
190
chromatin state
150
differential activity
93
binding sites
80
variant allelic effects
44
eQTL
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
466
September, 2022
443
February, 2021
324
November, 2021
276
September, 2023
254
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
28
October, 2022
23
January, 2020
16
April, 2020
14
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1545
bed bed3+
584
tsv
399
bigWig
158
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2361
Homo sapiens
Biosample type
2429
tissue
2406
primary cell
2252
cell line
470
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
lung
31
heart
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1731
AMP
324
ENCODE
276
KPMP
59
T1D
16
LungMap
Genome assembly (visualization)
1748
hg19
690
GRCh38
organ_slims!
lung
artery
BIOSAMPLE
TYPE
2406 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 436 more…
See all biosamples
Download