Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
46
target gene predictions
43
candidate regulatory elements
31
gene expression
23
chromatin state
19
binding sites
12
differential activity
12
histone modifications
11
variant allelic effects
4
eQTL
2
caQTL
Date released
66
September, 2022
53
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
11
June, 2020
10
October, 2022
7
March, 2023
6
May, 2021
5
February, 2020
5
January, 2020
5
May, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
195
bed bed3+
46
bigWig
35
tsv
23
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
265
Homo sapiens
Biosample type
265
primary cell
95
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
195
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
Genome assembly (visualization)
219
hg19
87
GRCh38
organ_slims!
lung
BIOSAMPLE
TYPE
265 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
osteoblast
5
2
2
2
1
3
2
foreskin fibroblast
1
2
6
1
4
2
fibroblast of cardiac tissue
2
4
3
3
+ See 42 more…
See all biosamples
Download