Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
435
gene expression
430
accessible chromatin
336
target gene predictions
307
candidate regulatory elements
204
histone modifications
111
differential activity
85
binding sites
71
variant allelic effects
46
eQTL
32
chromatin state
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
429
February, 2021
312
November, 2021
302
September, 2022
261
September, 2023
242
May, 2021
126
February, 2024
82
May, 2020
49
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
36
January, 2021
29
October, 2022
19
January, 2020
17
April, 2020
14
February, 2020
12
March, 2023
9
November, 2022
5
August, 2017
4
March, 2020
3
November, 2020
2
August, 2018
2
February, 2023
2
May, 2024
1
July, 2020
1
March, 2024
Available data
1454
bed bed3+
516
tsv
356
bigWig
bed bed9
108
txt
27
bed bed9+
2
bigBed bed9
2
bigBed narrowPeak
Organism
2033
Homo sapiens
Biosample type
2136
cell line
2078
primary cell
1994
tissue
427
in vitro differentiated cells
4
stem cell
Organ
775
epithelium
300
kidney
257
connective tissue
153
vasculature
pancreas
blood vessel
83
skin of body
61
liver
47
musculature of body
39
mammary gland
35
penis
32
extraembryonic component
31
brain
30
lung
28
heart
27
artery
23
intestine
20
eye
18
embryo
16
vein
15
lymphatic vessel
14
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1447
AMP
312
ENCODE
261
KPMP
39
T1D
17
LungMap
2
community
Genome assembly (visualization)
1498
hg19
497
GRCh38
organ_slims!
pancreas
blood vessel
files.file_type!
bed bed9
BIOSAMPLE
TYPE
2078 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
common myeloid progenitor, CD34-positive
14
27
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
6
10
14
+ See 413 more…
See all biosamples
Download