Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
459
accessible chromatin
448
gene expression
354
target gene predictions
296
candidate regulatory elements
207
histone modifications
chromatin state
135
differential activity
84
binding sites
72
variant allelic effects
44
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
428
February, 2021
327
November, 2021
296
September, 2022
254
May, 2021
246
September, 2023
136
February, 2024
78
May, 2020
56
January, 2021
51
March, 2023
50
June, 2020
42
August, 2021
37
January, 2022
27
October, 2022
16
April, 2020
14
February, 2020
14
January, 2020
13
May, 2022
9
August, 2018
9
November, 2022
5
October, 2019
4
March, 2020
3
November, 2020
2
February, 2023
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1486
bed bed3+
544
tsv
388
bigWig
106
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2075
Homo sapiens
Biosample type
2150
cell line
2120
primary cell
2073
tissue
424
in vitro differentiated cells
3
stem cell
Organ
772
epithelium
300
kidney
254
connective tissue
vasculature
126
pancreas
102
blood vessel
82
skin of body
61
liver
47
musculature of body
38
mammary gland
35
penis
32
extraembryonic component
31
brain
29
lung
28
heart
27
artery
23
intestine
20
eye
18
embryo
15
lymphatic vessel
15
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1472
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
Genome assembly (visualization)
1505
hg19
512
GRCh38
organ_slims!
vasculature
annotation_type!
chromatin state
BIOSAMPLE
TYPE
2120 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
3
5
7
30
common myeloid progenitor, CD34-positive
14
27
endothelial cell
15
9
7
1
2
2
1
2
B cell
6
2
10
14
+ See 414 more…
See all biosamples
Download