Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
29
target gene predictions
21
chromatin state
8
binding sites
7
accessible chromatin
6
histone modifications
3
eQTL
2
gene expression
variant allelic effects
Date released
60
September, 2022
39
February, 2021
10
November, 2021
4
May, 2021
3
January, 2022
3
October, 2022
2
June, 2020
2
March, 2024
1
August, 2017
Available data
99
bed bed3+
20
bed bed9
5
bigWig
2
tsv
Organism
124
Homo sapiens
Biosample type
99
primary cell
70
cell line
25
tissue
9
in vitro differentiated cells
Organ
841
epithelium
595
kidney
367
brain
364
connective tissue
349
musculature of body
252
intestine
238
vasculature
235
heart
230
pancreas
229
limb
214
lung
189
blood vessel
140
large intestine
138
extraembryonic component
124
skin of body
117
liver
117
stomach
91
eye
84
small intestine
82
adipose tissue
72
adrenal gland
70
placenta
67
artery
61
ureter
57
embryo
49
thymus
47
mammary gland
43
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
24
prostate gland
23
nerve
23
ovary
22
thyroid gland
20
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
17
lymphatic vessel
15
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
114
AMP
10
ENCODE
Genome assembly (visualization)
119
hg19
33
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
124 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
1
2
keratinocyte
3
5
3
1
2
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 8 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
skin of forearm
1
1
skin of prepuce of penis
1
1
+ See 2 more…
See all biosamples
Download