Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
53
target gene predictions
51
candidate regulatory elements
36
gene expression
28
chromatin state
25
binding sites
15
histone modifications
14
differential activity
11
variant allelic effects
6
eQTL
3
caQTL
Date released
81
September, 2022
63
February, 2021
52
November, 2021
20
September, 2023
13
February, 2024
13
June, 2020
12
October, 2022
8
May, 2021
7
February, 2020
7
March, 2023
5
January, 2020
5
May, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2021
2
May, 2024
1
August, 2017
1
August, 2018
1
August, 2021
1
June, 2021
1
October, 2019
Available data
226
bed bed3+
49
bigWig
42
tsv
27
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
309
Homo sapiens
Biosample type
309
primary cell
150
tissue
100
cell line
50
in vitro differentiated cells
1
stem cell
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
230
AMP
52
ENCODE
20
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
253
hg19
95
GRCh38
BIOSAMPLE
TYPE
309 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
+ See 51 more…
See all biosamples
Download