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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
483
accessible chromatin
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
76
variant allelic effects
12
gene expression
9
eQTL
5
caQTL
5
hQTL
3
meQTL
2
sQTL
1
other
Date released
222
November, 2021
52
June, 2020
47
May, 2020
31
February, 2024
28
January, 2021
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2021
13
May, 2022
9
November, 2022
5
October, 2019
5
September, 2022
2
November, 2020
1
February, 2021
1
January, 2022
1
June, 2021
Available data
481
bed bed3+
394
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
438
Homo sapiens
Biosample type
483
primary cell
197
tissue
163
cell line
62
in vitro differentiated cells
Organ
158
epithelium
62
connective tissue
37
pancreas
25
vasculature
22
kidney
17
blood vessel
17
liver
17
musculature of body
11
intestine
9
brain
9
lung
7
eye
7
skin of body
6
adrenal gland
6
extraembryonic component
6
heart
5
mammary gland
5
stomach
4
artery
4
embryo
3
bronchus
3
large intestine
3
lymphatic vessel
3
placenta
2
bone element
2
bone marrow
2
esophagus
2
gonad
2
small intestine
2
uterus
2
vein
1
blood
1
bodily fluid
1
ovary
1
penis
1
thymus
1
thyroid gland
1
trachea
Project
222
ENCODE
213
AMP
29
T1D
19
LungMap
Genome assembly (visualization)
483
hg19
282
GRCh38
BIOSAMPLE
TYPE
483 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
pericyte cell
10
smooth muscle cell
9
astrocyte
8
hepatocyte
8
pancreatic beta cell
8
pancreatic alpha cell
7
B cell
6
T cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
pancreatic acinar cell
6
pancreatic ductal cell
6
erythroblast
5
inhibitory neuron
5
osteoblast
5
pancreatic delta cell
5
regulatory T cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
CD8-positive, alpha-beta T cell
4
memory B cell
4
type II pneumocyte
4
cardiac fibroblast
3
T-helper 1 cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
hepatic stellate cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
retinal pigment epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
3
Muller cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipocyte
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
mesothelial cell
2
naive regulatory T cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasma cell
2
plasmacytoid dendritic cell
2
renal cortical epithelial cell
2
schwann cell
2
skeletal muscle myoblast
2
skin fibroblast
2
smooth muscle cell of the esophagus
2
B-Lymphocytes
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
aortic adventitial fibroblast
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
brain pericyte
1
bronchial epithelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
eccrine cell
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
erythroid cell
1
extravillous trophoblast
1
fetal thymocyte
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foveolar cell of stomach
1
gastric goblet cell
1
glomerular endothelial cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
immature natural killer cell
1
intestinal tuft cell
1
iris pigment epithelial cell
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
metanephros
1
microglial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neural cell
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-neuronal cell
1
non-pigmented ciliary epithelial cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral blood stem cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
preadipocyte
1
primordial germ cell
1
proximal tubule cells with injury markers
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
regular atrial cardiac myocyte
1
renal epithelial cell
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
somatic gonadal cell
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thyroid follicular cell
1
tracheal epithelial cell
1
trophoblast cell
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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