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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
193
February, 2021
171
September, 2023
68
May, 2021
53
February, 2024
25
August, 2021
23
October, 2022
16
February, 2020
13
March, 2023
9
August, 2018
4
March, 2020
1
July, 2020
1
March, 2024
1
November, 2020
Available data
437
tsv
108
txt
100
bed bed3+
9
bigWig
Organism
578
Homo sapiens
Biosample type
664
cell line
578
primary cell
146
tissue
112
in vitro differentiated cells
Organ
265
epithelium
190
kidney
52
connective tissue
46
vasculature
33
blood vessel
26
liver
25
pancreas
11
musculature of body
10
artery
7
mammary gland
6
heart
6
skin of body
4
penis
3
lymphatic vessel
2
blood
2
bodily fluid
2
bone element
2
bone marrow
2
brain
2
bronchus
2
extraembryonic component
2
eye
2
lung
2
placenta
2
trachea
2
vein
1
adipose tissue
1
embryo
1
pericardium
1
uterus
Project
407
AMP
171
KPMP
Genome assembly (visualization)
112
hg19
15
GRCh38
BIOSAMPLE
TYPE
578 results
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Clear Filters
gene expression
binding sites
primary cell
epithelial cell of proximal tubule
16
1
monocyte
15
1
glomerular endothelial cell
14
hepatocyte
13
1
endothelial cell
9
2
endothelial cell of hepatic sinusoid
4
6
regulatory T cell
7
1
T-helper 1 cell
7
T-helper 17 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney interstitial cell
6
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
osteoblast
2
3
foreskin fibroblast
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary epithelial cell
4
nephron progenitor
4
pancreatic ductal cell
3
1
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle myoblast
1
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
aortic adventitial fibroblast
2
bronchial epithelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endothelial cell of coronary artery
1
1
endothelial cell of umbilical vein
2
erythroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mast cell
1
1
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
meso-epithelial cell
1
1
mononuclear cell of bone marrow
2
myotube
2
naive B cel
2
natural killer cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
peripheral blood-derived erythroblast
2
plasma cell
1
1
renal epithelial cell
2
renal vesicle
2
retinal pigment epithelial cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
tracheal epithelial cell
2
vascular associated smooth muscle cell
2
Adipose stromal cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Schwann cell
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated pancreatic stellate cell
1
adipocyte
1
alpha-beta T cell
1
alternatively activated macrophage
1
aortic endothelial cell
1
aortic smooth muscle cell
1
astrocyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle myoblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia cell
1
colorectal cancer
1
columnar chondrocyte
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
1
erythroid cell
1
erythroid lineage cell
1
erythroid progenitor cell
1
fibroblast
1
fibroblast of dermis
1
glial cell
1
head and neck squamous cell carcinoma
1
hepatic stellate cell
1
induced T-regulatory cell
1
inflammatory macrophage
1
keratinocyte
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
leukemic stem cell
1
mammary gland epithelial cell
1
mature B cell
1
mature neutrophil
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
mononuclear cell
1
myeloid dendritic cell
1
myofibroblast cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neoplastic cell
1
neural cell
1
neuronal stem cell
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic epsilon cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
pericardium fibroblast
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
pre-B acute lymphoblastic leukemia cell
1
preadipocyte
1
primordial germ cell
1
prostate gland cancer cell
1
proximal tubule
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
renal principal cell
1
renal proximal tubule cell
1
small cell ovarian carcinoma cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
somatic muscle myotube
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
1
See all biosamples
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