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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
321
September, 2022
111
November, 2021
46
May, 2021
28
January, 2021
27
May, 2022
16
May, 2020
6
August, 2017
6
February, 2024
2
February, 2021
2
January, 2020
2
October, 2019
1
January, 2022
1
March, 2020
Available data
378
bed bed3+
164
bed bed9
27
bed bed9+
4
bigBed bed9
3
bigBed narrowPeak
3
bigWig
Organism
569
Homo sapiens
Biosample type
1029
tissue
590
cell line
569
primary cell
109
in vitro differentiated cells
4
stem cell
Organ
161
epithelium
77
connective tissue
44
skin of body
35
vasculature
24
blood vessel
24
pancreas
19
mammary gland
18
kidney
17
extraembryonic component
13
lung
13
penis
11
heart
9
embryo
9
vein
8
brain
8
intestine
8
musculature of body
6
eye
6
liver
5
artery
5
bone element
5
bone marrow
5
bronchus
5
lymphatic vessel
5
prostate gland
4
adrenal gland
4
esophagus
4
stomach
3
large intestine
2
mouth
2
placenta
2
small intestine
2
spinal cord
1
gonad
1
limb
1
ovary
1
thyroid gland
1
uterus
Project
430
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
569
hg19
281
GRCh38
BIOSAMPLE
TYPE
569 results
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target gene predictions
chromatin state
primary cell
common myeloid progenitor, CD34-positive
14
13
CD14-positive monocyte
19
4
B cell
10
8
CD4-positive, alpha-beta memory T cell
9
9
CD8-positive, alpha-beta memory T cell
7
7
mononuclear cell
6
6
pericyte cell
10
1
endothelial cell of umbilical vein
4
5
trophoblast cell
5
4
T cell
4
4
fibroblast of lung
4
4
foreskin keratinocyte
4
4
keratinocyte
5
3
natural killer cell
5
3
endothelial cell
7
fibroblast of cardiac tissue
4
3
fibroblast of dermis
4
3
mammary gland epithelial cell
4
3
mature neutrophil
7
regulatory T cell
4
3
CD4-positive, alpha-beta T cell
3
3
CD8-positive, alpha-beta T cell
5
1
T-helper 1 cell
3
3
T-helper 17 cell
3
3
T-helper 2 cell
3
3
naive T cell
3
3
neurosphere
3
3
olfactory receptor cell
6
smooth muscle cell
6
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
1
4
astrocyte
4
1
epithelial cell of prostate
3
2
neutrophil
3
2
skeletal muscle myoblast
2
3
skin fibroblast
3
2
bronchial epithelial cell
2
2
dermis blood vessel endothelial cell
2
2
dermis lymphatic vessel endothelial cell
2
2
erythroblast
2
2
fibroblast
4
fibroblast of breast
2
2
hepatocyte
3
1
inflammatory macrophage
1
3
kidney tubule cell
2
2
luminal epithelial cell of mammary gland
3
1
myoepithelial cell of mammary gland
2
2
pancreatic delta cell
4
skeletal muscle satellite cell
2
2
colon epithelial cell
3
foreskin fibroblast
2
1
macrophage
3
osteoblast
2
1
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
3
CD1c-positive myeloid dendritic cell
1
1
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
amnion mesenchymal stem cell
1
1
amniotic stem cell
1
1
astrocyte of the cerebellum
1
1
astrocyte of the hippocampus
1
1
astrocyte of the spinal cord
1
1
blood vessel smooth muscle cell
2
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
epidermal melanocyte
1
1
epithelial cell of amnion
1
1
epithelial cell of esophagus
1
1
epithelial cell of proximal tubule
1
1
fibroblast of gingiva
1
1
fibroblast of mammary gland
1
1
fibroblast of peridontal ligament
1
1
fibroblast of pulmonary artery
1
1
fibroblast of the aortic adventitia
1
1
fibroblast of the conjunctiva
1
1
fibroblast of villous mesenchyme
1
1
foreskin melanocyte
1
1
gabaergic neuron
2
glomerular endothelial cell
1
1
glomerular visceral epithelial cell
1
1
glutamatergic neuron
2
hepatic stellate cell
1
1
iris pigment epithelial cell
1
1
kidney capillary endothelial cell
1
1
kidney epithelial cell
1
1
kidney glomerular epithelial cell
1
1
lung microvascular endothelial cell
1
1
mammary epithelial cell
1
1
mammary stem cell
1
1
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
non-pigmented ciliary epithelial cell
1
1
pulmonary artery endothelial cell
1
1
regular cardiac myocyte
1
1
renal cortical epithelial cell
1
1
retinal pigment epithelial cell
1
1
skeletal muscle cell
1
1
smooth muscle cell of the brain vasculature
1
1
smooth muscle cell of the esophagus
2
stromal cell of bone marrow
1
1
type II pneumocyte
2
B cell, CD19-positive
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD56-positive, CD161-positive immature natural killer cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
cardiac muscle cell
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
fat cell
1
fibroblast of arm
1
foveolar cell of stomach
1
granular cell of epidermis
1
intestinal tuft cell
1
luteal cell
1
mast cell
1
mature NK T cell
1
mature eosinophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesenchymal stem cell
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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