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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
161
September, 2022
111
November, 2021
49
May, 2021
36
January, 2022
28
January, 2021
16
May, 2020
11
February, 2024
2
February, 2021
1
August, 2021
1
March, 2020
Available data
377
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
416
Homo sapiens
Biosample type
633
tissue
416
primary cell
409
cell line
65
in vitro differentiated cells
3
stem cell
Organ
115
epithelium
54
connective tissue
26
skin of body
24
pancreas
18
vasculature
12
blood vessel
11
mammary gland
9
extraembryonic component
9
kidney
8
heart
8
intestine
8
lung
7
musculature of body
7
penis
5
embryo
4
adrenal gland
4
brain
4
liver
4
stomach
4
vein
3
artery
3
bone element
3
bone marrow
3
bronchus
3
esophagus
3
eye
3
large intestine
3
lymphatic vessel
3
prostate gland
2
gonad
2
small intestine
1
limb
1
mouth
1
ovary
1
placenta
1
spinal cord
1
testis
1
thyroid gland
1
uterus
Project
277
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
381
hg19
152
GRCh38
BIOSAMPLE
TYPE
416 results
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target gene predictions
eQTL
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
macrophage
3
7
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
endothelial cell
7
1
CD8-positive, alpha-beta memory T cell
7
smooth muscle cell
6
1
T cell
4
2
fibroblast
4
2
monocyte
2
4
mononuclear cell
6
natural killer cell
5
1
olfactory receptor cell
6
regulatory T cell
4
2
CD8-positive, alpha-beta T cell
5
keratinocyte
5
neutrophil
3
2
trophoblast cell
5
T-helper 1 cell
3
1
T-helper 17 cell
3
1
T-helper 2 cell
3
1
astrocyte
4
endothelial cell of umbilical vein
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
mammary gland epithelial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
2
2
pancreatic delta cell
4
CD4-positive, alpha-beta T cell
3
activated CD4-positive, alpha-beta T cell
2
1
blood cell
3
colon epithelial cell
3
epithelial cell of prostate
3
hepatocyte
3
luminal epithelial cell of mammary gland
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
1
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
skin fibroblast
3
type B pancreatic cell
3
CD4-positive helper T cell
2
T-cell
2
activated CD8-positive, alpha-beta T cell
1
1
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fat cell
1
1
fibroblast of breast
2
foreskin fibroblast
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
megakaryocyte
2
memory B cell
2
microglial cell
1
1
myoepithelial cell of mammary gland
2
naive B cell
2
osteoblast
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
type I muscle cell
1
1
type II muscle cell
1
1
type II pneumocyte
2
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Leydig cell
1
T follicular helper cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
helper T cell
1
hepatic stellate cell
1
inflammatory macrophage
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary epithelial cell
1
mammary stem cell
1
mast cell
1
mature NK T cell
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesenchymal stem cell
1
mesothelial cell
1
myoepithelial cell
1
naive B cel
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
progenitor cell
1
pulmonary artery endothelial cell
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
schwann cell
1
sensory neuron
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
stromal cell of bone marrow
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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