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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
890
target gene predictions
708
chromatin state
681
accessible chromatin
588
gene expression
299
histone modifications
159
eQTL
157
differential activity
136
binding sites
129
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
620
September, 2022
111
November, 2021
74
May, 2021
30
March, 2020
28
January, 2021
17
May, 2020
6
February, 2024
2
February, 2021
1
January, 2020
1
January, 2022
Available data
890
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
890
Homo sapiens
Biosample type
518
tissue
399
cell line
372
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
119
epithelium
75
musculature of body
68
kidney
65
intestine
62
connective tissue
52
lung
51
brain
49
heart
48
limb
39
pancreas
36
large intestine
33
extraembryonic component
31
vasculature
30
stomach
29
skin of body
25
blood vessel
23
small intestine
21
adrenal gland
16
placenta
15
liver
14
thymus
13
embryo
13
ureter
12
adipose tissue
11
mammary gland
10
esophagus
10
gonad
9
spinal cord
8
artery
8
eye
8
spleen
7
ovary
7
penis
6
bone element
6
thyroid gland
5
prostate gland
4
lymphoid tissue
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
mouth
3
nerve
3
skeleton
3
testis
3
urinary bladder
3
uterus
2
tongue
2
vagina
Project
751
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
890
hg19
117
GRCh38
BIOSAMPLE
TYPE
890 results
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target gene predictions
tissue
stomach
21
heart
20
adrenal gland
17
lung
17
small intestine
17
brain
16
muscle of arm
16
placenta
15
kidney
14
large intestine
14
muscle of leg
14
thymus
14
left lung
13
muscle of back
13
right lung
11
liver
10
right kidney
10
left kidney
9
renal cortex interstitium
9
renal pelvis
9
adipose tissue
8
psoas muscle
8
spinal cord
8
spleen
8
heart left ventricle
7
sigmoid colon
7
ovary
6
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
muscle of trunk
5
pancreas
5
thyroid gland
5
transverse colon
5
aorta
4
chorionic villus
4
endocrine pancreas
4
Peyer's patch
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
esophagus
3
layer of hippocampus
3
retina
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
trophoblast
3
upper lobe of left lung
3
Ammon's horn
2
Brodmann (1909) area 46
2
angular gyrus
2
ascending aorta
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
frontal cortex
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
urinary bladder
2
uterus
2
vagina
2
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
cerebellar cortex
1
dorsolateral prefrontal cortex
1
embryonic facial prominence
1
femur
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
inferior parietal cortex
1
islet of Langerhans
1
left cardiac atrium
1
leg bone
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
occipital lobe
1
pons
1
putamen
1
rectum smooth muscle tissue
1
right lobe of liver
1
skin of body
1
superior temporal gyrus
1
umbilical cord
1
white adipose tissue
1
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
CD8-positive, alpha-beta memory T cell
7
endothelial cell
7
mononuclear cell
6
olfactory receptor cell
6
smooth muscle cell
6
CD8-positive, alpha-beta T cell
5
keratinocyte
5
natural killer cell
5
trophoblast cell
5
T cell
4
astrocyte
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
mammary gland epithelial cell
4
pancreatic delta cell
4
regulatory T cell
4
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
colon epithelial cell
3
epithelial cell of prostate
3
hepatocyte
3
luminal epithelial cell of mammary gland
3
macrophage
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
skin fibroblast
3
type B pancreatic cell
3
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fibroblast of breast
2
foreskin fibroblast
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
megakaryocyte
2
memory B cell
2
monocyte
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
osteoblast
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
type II pneumocyte
2
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
hepatic stellate cell
1
inflammatory macrophage
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary epithelial cell
1
mammary stem cell
1
mast cell
1
mature NK T cell
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
pulmonary artery endothelial cell
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
schwann cell
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
stromal cell of bone marrow
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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