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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
57
candidate regulatory elements
54
target gene predictions
31
chromatin state
31
gene expression
22
binding sites
15
variant allelic effects
12
differential activity
12
histone modifications
4
eQTL
2
caQTL
Date released
87
September, 2022
60
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
13
October, 2022
12
June, 2020
9
January, 2020
9
May, 2020
7
March, 2023
7
May, 2021
5
February, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
230
bed bed3+
50
bigWig
35
tsv
30
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
307
Homo sapiens
Biosample type
444
tissue
307
primary cell
107
cell line
54
in vitro differentiated cells
2
stem cell
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
237
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
Genome assembly (visualization)
261
hg19
98
GRCh38
BIOSAMPLE
TYPE
307 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
fibroblast of cardiac tissue
2
3
4
3
fibroblast of dermis
4
4
3
1
hepatic stellate cell
3
1
1
1
1
1
1
skin fibroblast
2
2
3
2
fibroblast of mammary gland
1
2
1
1
2
1
fibroblast of pulmonary artery
1
2
1
1
2
1
fibroblast of villous mesenchyme
1
2
1
1
2
1
pancreatic stellate cell
2
1
2
3
choroid plexus epithelial cell
1
2
1
1
1
1
mesangial cell
2
5
mesenchymal stem cell
2
1
1
1
1
1
astrocyte of the cerebellum
1
2
1
1
1
astrocyte of the hippocampus
1
2
1
1
1
cardiac fibroblast
3
2
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Fibroblast
3
2
Mesangial Cell
3
2
brain microvascular endothelial cell
1
2
1
1
fibroblast of peridontal ligament
1
2
1
1
fibroblast of the aortic adventitia
2
1
1
1
adipocyte
2
1
1
adult endothelial progenitor cell
1
3
cardiac fibroblast
3
1
fibroblast of gingiva
2
1
1
fibroblast of the conjunctiva
2
1
1
preadipocyte
1
1
2
stromal cell of bone marrow
2
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
brain pericyte
1
1
1
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
1
1
1
columnar chondrocyte
1
1
extracellular matrix secreting cell
2
fat cell
1
1
luteal cell
1
1
stromal cell
1
1
brain microvascular endothelial cell
1
Glioblastoma
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
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