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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
54
accessible chromatin
30
differential activity
30
gene expression
29
target gene predictions
10
variant allelic effects
6
binding sites
histone modifications
4
candidate regulatory elements
3
chromatin state
2
caQTL
2
eQTL
Date released
39
March, 2023
29
November, 2021
26
February, 2024
20
January, 2021
12
May, 2021
10
February, 2021
10
September, 2022
7
August, 2018
6
October, 2019
3
May, 2022
3
October, 2022
1
February, 2020
1
January, 2020
1
June, 2020
1
June, 2021
1
May, 2020
Available data
105
bed bed3+
52
bigWig
47
tsv
14
bigBed narrowPeak
3
bam
3
bed bed9
3
bed gappedPeak
3
xls
1
bigBed bed9
Organism
170
Homo sapiens
Biosample type
415
tissue
170
primary cell
49
cell line
5
in vitro differentiated cells
Organ
802
epithelium
309
kidney
271
connective tissue
166
vasculature
123
pancreas
111
blood vessel
96
skin of body
58
liver
47
musculature of body
45
mammary gland
39
penis
38
extraembryonic component
35
brain
34
lung
30
heart
26
artery
22
eye
22
intestine
21
embryo
20
vein
17
lymphatic vessel
15
bronchus
11
adrenal gland
11
bone element
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
9
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
121
AMP
29
ENCODE
20
T1D
Genome assembly (visualization)
115
hg19
38
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
170 results
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accessible chromatin
differential activity
gene expression
target gene predictions
variant allelic effects
binding sites
candidate regulatory elements
chromatin state
caQTL
eQTL
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
skeletal muscle satellite cell
5
2
2
2
2
skeletal muscle fiber
5
2
2
pancreatic stellate cell
2
3
2
1
type I muscle cell
3
1
1
1
1
type II muscle cell
3
1
1
1
1
pancreatic polypeptide-secreting cell
2
2
1
1
skeletal muscle cell
1
1
1
2
1
pancreatic alpha+beta cell
3
1
pancreatic cycling alpha cell
3
1
pancreatic gamma+epsilon cell
3
1
pancreatic A cell
3
pancreatic quiescent stellate cell
3
type B pancreatic cell
3
myotube
2
activated pancreatic stellate cell
1
aortic smooth muscle cell
1
cardiac muscle myoblast
1
islet of Langerhans
1
pancreatic endocrine cell
1
quiescent pancreatic stellate cell
1
somatic muscle myotube
1
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