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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
239
gene expression
120
accessible chromatin
92
differential activity
82
target gene predictions
65
candidate regulatory elements
36
chromatin state
24
variant allelic effects
23
binding sites
15
histone modifications
6
eQTL
2
caQTL
Date released
156
February, 2021
155
September, 2023
106
September, 2022
71
November, 2021
39
March, 2023
25
February, 2024
20
August, 2021
20
January, 2021
17
June, 2020
17
May, 2021
13
October, 2022
12
February, 2020
12
January, 2020
11
May, 2020
7
August, 2018
6
October, 2019
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
May, 2024
1
August, 2017
1
February, 2023
1
June, 2021
Available data
327
bed bed3+
312
tsv
102
bigWig
93
txt
35
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
1
bigBed bed9
Organism
704
Homo sapiens
Biosample type
704
primary cell
508
tissue
106
cell line
54
in vitro differentiated cells
1
stem cell
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
453
AMP
155
KPMP
71
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
365
hg19
132
GRCh38
BIOSAMPLE
TYPE
704 results
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Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
fibroblast
16
4
6
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
osteoblast
2
5
2
2
1
3
2
pancreatic alpha cell
3
7
3
3
1
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
3
5
3
4
1
fibroblast of cardiac tissue
2
4
3
3
fibroblast of dermis
4
4
3
1
glomerular visceral epithelial cell
5
2
1
2
1
kidney tubule cell
1
2
2
3
2
hepatic stellate cell
1
3
1
1
1
1
1
skin fibroblast
2
3
2
2
fibroblast of mammary gland
1
1
2
1
2
1
fibroblast of pulmonary artery
1
1
2
1
2
1
fibroblast of villous mesenchyme
1
1
2
1
2
1
kidney glomerular epithelial cell
1
2
1
2
1
1
pancreatic stellate cell
2
2
3
1
renal cortical epithelial cell
1
2
1
2
1
1
kidney epithelial cell
1
1
1
2
1
1
kidney interstitial cell
6
1
kidney loop of Henle thin ascending limb epithelial cell
7
mesangial cell
5
2
mesenchymal stem cell
1
2
1
1
1
1
pancreatic polypeptide-secreting cell
2
2
1
1
cardiac fibroblast
3
2
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
Afferent / Efferent Arteriole Endothelial Cell
3
2
Connecting Tubule Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Peritubular Capillary Endothelial Cell
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Fibroblast
3
2
Glomerular Capillary Endothelial Cell
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
Medullary Thick Ascending Limb Cell
3
2
Mesangial Cell
3
2
Parietal Epithelial Cell
3
2
Peritubular Capillary Endothelial Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Renin-positive Juxtaglomerular Granular Cell
3
2
fibroblast of peridontal ligament
1
1
2
1
fibroblast of the aortic adventitia
1
2
1
1
kidney capillary endothelial cell
1
1
1
1
1
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
4
1
kidney loop of Henle thick ascending limb epithelial cell
5
adipocyte
1
2
1
adult endothelial progenitor cell
3
1
cardiac fibroblast
3
1
fibroblast of gingiva
1
2
1
fibroblast of the conjunctiva
1
2
1
kidney connecting tubule epithelial cell
4
pancreatic alpha+beta cell
1
3
pancreatic cycling alpha cell
1
3
pancreatic gamma+epsilon cell
1
3
preadipocyte
1
1
2
stromal cell of bone marrow
1
2
1
S-shaped body
3
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
brain pericyte
1
1
1
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
pancreatic A cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
1
1
1
type B pancreatic cell
3
articular chondrocyte
2
columnar chondrocyte
1
1
extracellular matrix secreting cell
2
fat cell
1
1
kidney inner medulla collecting duct intercalated cell
2
luteal cell
1
1
pancreatic endocrine cell
1
1
renal principal cell
1
1
stromal cell
1
1
ureteric bud
1
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
epithelial cell of distal tubule
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
islet of Langerhans
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mesenchymal stem cell of adipose
1
metanephros
1
parietal epithelial cell
1
pericardium fibroblast
1
proximal tubule
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
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