Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
936
candidate regulatory elements
518
target gene predictions
506
chromatin state
182
accessible chromatin
113
eQTL
89
histone modifications
82
gene expression
74
Fine-mapped variants
48
variant allelic effects
36
binding sites
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1377
September, 2022
641
February, 2021
104
March, 2020
63
June, 2020
62
January, 2020
60
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
26
February, 2023
19
August, 2017
17
November, 2022
9
May, 2019
8
April, 2019
8
November, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1786
bed bed3+
486
bed bed9
177
tsv
105
bigWig
31
bigBed bed9
1
bam
Organism
2594
Homo sapiens
Biosample type
2596
tissue
2183
cell line
2038
primary cell
434
in vitro differentiated cells
3
stem cell
Organ
348
brain
303
musculature of body
298
kidney
235
limb
228
intestine
208
heart
180
lung
131
large intestine
106
stomach
104
pancreas
98
extraembryonic component
91
connective tissue
82
adipose tissue
82
blood vessel
82
vasculature
80
small intestine
69
eye
64
ureter
61
adrenal gland
60
placenta
56
liver
49
epithelium
48
thymus
42
artery
37
gonad
36
spinal cord
35
embryo
33
esophagus
33
spleen
25
nerve
23
skin of body
22
bone element
20
ovary
19
thyroid gland
18
skeleton
17
lymphoid tissue
17
testis
14
prostate gland
12
breast
11
uterus
10
mouth
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2591
AMP
5
community
Genome assembly (visualization)
2435
hg19
715
GRCh38
3
hg18
BIOSAMPLE
TYPE
2596 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
gene expression
Fine-mapped variants
variant allelic effects
binding sites
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
4
1
3
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
9
1
2
7
1
1
brain
29
16
18
2
2
3
1
1
1
lung
33
17
16
1
+ See 232 more…
See all biosamples
Download