Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
890
target gene predictions
chromatin state
681
accessible chromatin
588
gene expression
299
histone modifications
159
eQTL
157
differential activity
136
binding sites
129
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1245
September, 2022
1097
February, 2021
333
November, 2021
287
May, 2021
281
September, 2023
173
February, 2024
143
May, 2020
116
June, 2020
109
March, 2020
93
January, 2022
88
August, 2021
79
January, 2020
64
February, 2020
61
March, 2023
56
January, 2021
31
October, 2022
30
February, 2023
29
March, 2024
26
November, 2022
19
April, 2020
15
May, 2022
9
August, 2018
9
November, 2019
7
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3415
bed bed3+
801
tsv
528
bigWig
108
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
4366
Homo sapiens
Biosample type
2272
primary cell
2161
cell line
2141
tissue
426
in vitro differentiated cells
3
stem cell
Organ
829
epithelium
540
kidney
339
connective tissue
323
brain
285
musculature of body
226
pancreas
220
vasculature
200
intestine
194
heart
188
limb
170
blood vessel
167
lung
109
liver
108
large intestine
107
extraembryonic component
104
skin of body
95
stomach
85
eye
75
adipose tissue
64
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
46
embryo
40
mammary gland
38
esophagus
38
thymus
37
penis
36
gonad
32
spinal cord
31
bone element
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
uterus
16
testis
16
vein
15
lymphatic vessel
15
skeleton
14
bronchus
14
lymphoid tissue
13
bodily fluid
12
blood
12
mouth
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
3716
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
3553
hg19
786
GRCh38
3
hg18
annotation_type!
chromatin state
BIOSAMPLE
TYPE
4413 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
histone modifications
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
primary cell
monocyte
2
18
15
86
4
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
4
3
30
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
9
1
1
2
2
2
B cell
14
10
6
2
+ See 444 more…
tissue
heart
37
20
5
3
1
1
2
stomach
40
21
3
1
1
1
kidney
29
14
10
7
2
1
1
1
brain
29
16
2
1
3
2
1
1
lung
33
17
1
1
+ See 260 more…
See all biosamples
Download