Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
890
target gene predictions
708
chromatin state
681
accessible chromatin
gene expression
299
histone modifications
159
eQTL
157
differential activity
136
binding sites
129
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1864
September, 2022
947
February, 2021
333
November, 2021
217
May, 2021
146
May, 2020
131
February, 2024
116
June, 2020
110
September, 2023
103
March, 2020
93
January, 2022
68
January, 2020
56
January, 2021
54
August, 2021
48
March, 2023
42
May, 2022
31
October, 2022
30
February, 2023
26
February, 2020
26
November, 2022
25
August, 2017
19
April, 2020
12
October, 2019
10
November, 2019
9
May, 2019
8
April, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3445
bed bed3+
650
bed bed9
521
bigWig
256
tsv
35
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4486
Homo sapiens
Biosample type
2542
tissue
2331
cell line
1991
primary cell
396
in vitro differentiated cells
4
stem cell
Organ
643
epithelium
411
kidney
366
brain
345
musculature of body
329
connective tissue
252
intestine
232
limb
226
heart
218
vasculature
214
lung
203
pancreas
174
blood vessel
138
extraembryonic component
138
large intestine
123
skin of body
117
stomach
100
liver
92
eye
84
small intestine
72
adipose tissue
72
adrenal gland
70
placenta
64
artery
64
ureter
57
embryo
49
thymus
48
mammary gland
43
esophagus
43
penis
41
gonad
39
spinal cord
33
spleen
32
bone element
24
prostate gland
23
nerve
22
ovary
22
thyroid gland
20
vein
18
skeleton
18
testis
17
lymphoid tissue
16
bronchus
16
uterus
14
lymphatic vessel
14
mouth
13
bone marrow
12
bodily fluid
12
breast
11
blood
9
tongue
9
urinary bladder
9
vagina
5
trachea
2
pituitary gland
Project
4007
AMP
333
ENCODE
110
KPMP
59
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
4249
hg19
1432
GRCh38
3
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
4533 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
tissue
heart
37
20
21
5
1
1
2
stomach
40
21
19
3
1
1
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
2
1
1
lung
33
17
16
1
+ See 235 more…
primary cell
monocyte
2
18
86
4
1
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
1
4
30
B cell
14
10
8
6
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 400 more…
See all biosamples
Download