Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1265
candidate regulatory elements
890
target gene predictions
708
chromatin state
681
accessible chromatin
299
histone modifications
136
binding sites
134
eQTL
129
variant allelic effects
43
gene expression
13
caQTL
5
hQTL
5
sQTL
3
meQTL
3
pQTL
2
Fine-mapped variants
2
other
2
variant to gene
Date released
1864
September, 2022
947
February, 2021
333
November, 2021
219
May, 2021
146
May, 2020
138
February, 2024
116
June, 2020
93
January, 2022
68
January, 2020
56
January, 2021
54
August, 2021
42
May, 2022
35
March, 2020
31
October, 2022
30
February, 2023
26
November, 2022
25
August, 2017
19
April, 2020
17
February, 2020
12
October, 2019
10
November, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3445
bed bed3+
tsv
650
bed bed9
530
bigWig
108
txt
35
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4274
Homo sapiens
Biosample type
2440
tissue
2330
cell line
1880
primary cell
395
in vitro differentiated cells
4
stem cell
Organ
573
epithelium
362
kidney
342
musculature of body
318
brain
315
connective tissue
252
intestine
220
limb
218
heart
214
lung
190
vasculature
176
pancreas
152
blood vessel
138
extraembryonic component
138
large intestine
123
skin of body
117
stomach
96
liver
91
eye
84
small intestine
72
adrenal gland
70
placenta
64
ureter
63
adipose tissue
57
embryo
56
artery
49
thymus
48
mammary gland
43
esophagus
43
penis
41
gonad
35
spinal cord
33
spleen
32
bone element
24
prostate gland
22
ovary
22
thyroid gland
20
vein
19
nerve
18
skeleton
18
testis
17
lymphoid tissue
16
bronchus
16
uterus
14
mouth
13
bone marrow
12
bodily fluid
12
breast
12
lymphatic vessel
11
blood
9
tongue
9
urinary bladder
9
vagina
5
trachea
2
pituitary gland
1
pericardium
Project
3904
AMP
333
ENCODE
59
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
4165
hg19
1335
GRCh38
3
hg18
files.file_type!
tsv
BIOSAMPLE
TYPE
4320 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
variant allelic effects
gene expression
caQTL
hQTL
sQTL
meQTL
pQTL
Fine-mapped variants
other
variant to gene
tissue
heart
37
20
21
5
1
1
2
stomach
40
21
19
3
1
1
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
1
2
1
lung
33
17
16
1
+ See 230 more…
primary cell
monocyte
2
18
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
1
4
30
B cell
14
10
8
6
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 344 more…
See all biosamples
Download