Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
479
candidate regulatory elements
193
accessible chromatin
115
eQTL
110
gene expression
89
histone modifications
74
Fine-mapped variants
59
target gene predictions
chromatin state
48
variant allelic effects
36
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
September, 2022
641
February, 2021
104
March, 2020
63
June, 2020
58
January, 2020
57
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
28
March, 2024
26
February, 2023
21
February, 2024
17
November, 2022
9
November, 2019
6
March, 2023
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
August, 2020
1
August, 2022
Available data
905
bed bed3+
212
tsv
114
bigWig
Organism
1218
Homo sapiens
Biosample type
1947
primary cell
1798
cell line
1220
tissue
356
in vitro differentiated cells
3
stem cell
Organ
202
brain
122
kidney
112
musculature of body
100
heart
97
limb
79
pancreas
76
intestine
67
connective tissue
56
adipose tissue
55
eye
52
lung
49
epithelium
48
blood vessel
48
vasculature
45
large intestine
38
stomach
31
liver
29
extraembryonic component
28
artery
25
ureter
22
small intestine
20
adrenal gland
18
gonad
18
placenta
17
esophagus
16
skin of body
16
spleen
15
nerve
15
spinal cord
15
thymus
14
embryo
13
bone element
10
uterus
9
ovary
9
prostate gland
9
skeleton
9
testis
8
thyroid gland
7
breast
6
lymphoid tissue
5
mouth
4
bodily fluid
4
tongue
4
urinary bladder
4
vagina
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
1215
AMP
5
ITG
Genome assembly (visualization)
1026
hg19
239
GRCh38
3
hg18
month_released!
September, 2018
September, 2022
annotation_type!
chromatin state
BIOSAMPLE
TYPE
1220 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
target gene predictions
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
islet of Langerhans
5
13
11
1
2
1
1
2
2
2
kidney
15
10
1
7
2
1
1
heart
18
5
3
1
1
2
1
retina
3
23
1
1
1
1
1
stomach
21
3
1
1
1
2
+ See 255 more…
See all biosamples
Download