Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
915
candidate regulatory elements
504
target gene predictions
500
chromatin state
188
accessible chromatin
87
histone modifications
66
Fine-mapped variants
44
eQTL
34
variant allelic effects
33
binding sites
2
variant to gene
1
caQTL
1
pQTL
1
sQTL
Date released
1350
September, 2022
594
February, 2021
95
March, 2020
62
June, 2020
45
May, 2020
42
January, 2020
26
August, 2021
25
February, 2023
25
May, 2021
23
February, 2020
19
February, 2024
17
August, 2017
16
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
5
October, 2019
2
May, 2022
1
August, 2020
1
August, 2022
1
September, 2018
Available data
1791
bed bed3+
477
bed bed9
113
bigWig
88
tsv
30
bigBed bed9
1
bam
Organism
2375
Homo sapiens
Biosample type
2376
tissue
2214
cell line
1563
primary cell
339
in vitro differentiated cells
3
stem cell
Organ
307
brain
299
musculature of body
287
kidney
229
limb
226
intestine
195
heart
179
lung
130
large intestine
105
stomach
97
extraembryonic component
91
pancreas
79
small intestine
74
blood vessel
74
vasculature
connective tissue
68
eye
65
adipose tissue
64
ureter
60
adrenal gland
59
epithelium
59
placenta
53
liver
48
thymus
36
artery
35
embryo
35
gonad
34
spinal cord
32
spleen
30
esophagus
22
nerve
20
skin of body
19
ovary
18
bone element
18
skeleton
18
thyroid gland
17
lymphoid tissue
16
testis
13
prostate gland
11
breast
uterus
9
mouth
9
tongue
9
urinary bladder
8
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
1
pituitary gland
Project
2375
AMP
1
ITG
Genome assembly (visualization)
2376
hg19
707
GRCh38
1
hg18
organ_slims!
connective tissue
uterus
BIOSAMPLE
TYPE
2376 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
binding sites
variant to gene
caQTL
pQTL
sQTL
tissue
heart
37
20
21
5
1
2
1
stomach
40
21
19
3
1
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
1
1
muscle of arm
33
16
16
1
1
+ See 213 more…
See all biosamples
Download