Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
917
candidate regulatory elements
503
target gene predictions
497
chromatin state
177
accessible chromatin
100
eQTL
gene expression
87
histone modifications
69
Fine-mapped variants
45
variant allelic effects
33
binding sites
5
differential activity
3
pQTL
2
caQTL
2
variant to gene
1
other
Date released
1346
September, 2022
598
February, 2021
96
March, 2020
60
June, 2020
55
May, 2020
52
January, 2022
42
January, 2020
29
August, 2021
26
February, 2023
26
May, 2021
25
February, 2020
17
November, 2022
16
August, 2017
16
February, 2024
9
May, 2019
9
November, 2019
7
April, 2019
4
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1781
bed bed3+
476
bed bed9
104
bigWig
98
tsv
29
bigBed bed9
1
bam
Organism
2439
Homo sapiens
Biosample type
2441
tissue
2305
cell line
1889
primary cell
396
in vitro differentiated cells
4
stem cell
Organ
331
brain
301
musculature of body
291
kidney
231
limb
229
intestine
199
heart
180
lung
132
large intestine
106
stomach
pancreas
98
extraembryonic component
80
small intestine
79
blood vessel
79
connective tissue
79
vasculature
72
adipose tissue
69
eye
64
ureter
61
adrenal gland
60
placenta
59
epithelium
56
liver
48
thymus
40
artery
37
gonad
35
embryo
35
spinal cord
33
esophagus
33
spleen
23
nerve
23
skin of body
20
ovary
19
thyroid gland
18
bone element
18
skeleton
17
lymphoid tissue
17
testis
14
prostate gland
12
breast
11
uterus
10
mouth
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2436
AMP
5
ITG
Genome assembly (visualization)
2367
hg19
700
GRCh38
3
hg18
organ_slims!
pancreas
annotation_type!
gene expression
BIOSAMPLE
TYPE
2441 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
pQTL
caQTL
variant to gene
other
tissue
heart
37
20
21
5
1
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
10
1
2
1
1
brain
29
16
18
2
2
3
1
1
lung
33
17
16
1
+ See 224 more…
See all biosamples
Download