Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
788
candidate regulatory elements
440
target gene predictions
436
chromatin state
188
accessible chromatin
108
eQTL
gene expression
86
histone modifications
65
Fine-mapped variants
44
variant allelic effects
35
binding sites
4
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1167
September, 2022
529
February, 2021
90
March, 2020
58
June, 2020
56
May, 2020
54
January, 2022
41
January, 2020
36
August, 2021
26
February, 2023
25
February, 2024
24
May, 2021
23
February, 2020
17
November, 2022
16
August, 2017
10
November, 2019
8
April, 2019
7
May, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1603
bed bed3+
414
bed bed9
116
bigWig
91
tsv
29
bigBed bed9
1
bam
Organism
2204
Homo sapiens
Biosample type
2311
cell line
2206
tissue
1945
primary cell
394
in vitro differentiated cells
4
stem cell
Organ
331
brain
musculature of body
291
kidney
231
limb
229
intestine
199
heart
180
lung
132
large intestine
106
stomach
101
pancreas
98
extraembryonic component
80
small intestine
79
blood vessel
79
connective tissue
79
vasculature
72
adipose tissue
69
eye
64
ureter
61
adrenal gland
60
placenta
59
epithelium
56
liver
48
thymus
40
artery
37
gonad
35
embryo
spinal cord
33
esophagus
33
spleen
23
nerve
23
skin of body
20
ovary
19
thyroid gland
18
bone element
18
skeleton
17
lymphoid tissue
17
testis
14
prostate gland
12
breast
11
uterus
10
mouth
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2201
AMP
5
ITG
Genome assembly (visualization)
2125
hg19
644
GRCh38
3
hg18
organ_slims!
spinal cord
musculature of body
annotation_type!
gene expression
BIOSAMPLE
TYPE
2206 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
5
1
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
10
1
2
1
1
brain
29
16
18
2
2
3
1
1
lung
33
17
16
1
+ See 212 more…
See all biosamples
Download