Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
accessible chromatin
21
gene expression
17
candidate regulatory elements
15
target gene predictions
12
chromatin state
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
30
September, 2022
26
February, 2024
17
February, 2021
9
August, 2021
9
March, 2020
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
73
bed bed3+
25
tsv
22
bigWig
10
bed bed9
1
bam
1
bigBed bed9
Organism
121
Homo sapiens
Biosample type
63
primary cell
58
tissue
28
cell line
7
in vitro differentiated cells
Organ
880
epithelium
610
kidney
384
brain
376
connective tissue
356
musculature of body
255
intestine
253
vasculature
245
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
121
liver
119
stomach
93
eye
85
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
57
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
17
lymphatic vessel
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
116
AMP
5
ENCODE
Genome assembly (visualization)
93
hg19
51
GRCh38
1
hg18
BIOSAMPLE
TYPE
121 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
13
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
1
13
10
9
1
7
2
1
1
right lobe of liver
1
2
1
1
1
3
Download