Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
911
candidate regulatory elements
506
target gene predictions
498
chromatin state
196
accessible chromatin
113
eQTL
110
gene expression
87
histone modifications
74
Fine-mapped variants
48
variant allelic effects
35
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
Date released
1335
September, 2022
626
February, 2021
106
March, 2020
62
January, 2020
62
June, 2020
59
May, 2020
55
January, 2022
47
February, 2020
46
August, 2021
30
May, 2021
28
March, 2024
26
February, 2023
26
February, 2024
20
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
September, 2023
Available data
1809
bed bed3+
472
bed bed9
211
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
2594
Homo sapiens
Biosample type
2590
tissue
2416
primary cell
2349
cell line
470
in vitro differentiated cells
4
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
96
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
placenta
58
liver
48
thymus
42
artery
39
gonad
36
embryo
36
spinal cord
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2589
AMP
5
ITG
Genome assembly (visualization)
2402
hg19
718
GRCh38
3
hg18
organ_slims!
placenta
BIOSAMPLE
TYPE
2594 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 259 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download