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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
509
chromatin state
90
eQTL
89
histone modifications
79
accessible chromatin
48
variant allelic effects
36
binding sites
3
pQTL
2
Fine-mapped variants
2
caQTL
2
gene expression
2
sQTL
2
variant to gene
1
other
Date released
1376
September, 2022
605
February, 2021
63
June, 2020
56
January, 2022
53
May, 2020
31
May, 2021
30
August, 2021
30
March, 2020
19
August, 2017
8
April, 2019
8
February, 2024
8
November, 2022
7
February, 2023
7
May, 2019
5
January, 2020
4
March, 2023
3
October, 2019
2
May, 2022
1
August, 2020
1
August, 2022
1
February, 2020
1
November, 2019
Available data
1850
bed bed3+
486
bed bed9
tsv
bigWig
31
bigBed bed9
1
bam
Organism
2319
Homo sapiens
Biosample type
2326
cell line
2320
tissue
1479
primary cell
383
in vitro differentiated cells
4
stem cell
Organ
288
musculature of body
274
kidney
271
brain
229
intestine
205
limb
180
lung
172
heart
132
large intestine
106
stomach
98
extraembryonic component
81
pancreas
80
small intestine
62
connective tissue
61
adrenal gland
61
ureter
60
placenta
58
blood vessel
58
vasculature
57
adipose tissue
49
liver
48
thymus
39
eye
38
epithelium
37
gonad
35
embryo
33
esophagus
32
spleen
31
spinal cord
26
artery
23
skin of body
20
ovary
19
thyroid gland
17
lymphoid tissue
17
nerve
17
testis
14
prostate gland
12
breast
11
uterus
10
bone element
10
mouth
10
skeleton
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2315
AMP
5
ITG
Genome assembly (visualization)
2242
hg19
546
GRCh38
3
hg18
files.file_type!
tsv
bigWig
BIOSAMPLE
TYPE
2320 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
histone modifications
accessible chromatin
variant allelic effects
binding sites
pQTL
Fine-mapped variants
caQTL
gene expression
sQTL
variant to gene
other
tissue
stomach
40
21
19
1
1
3
heart
37
20
21
1
2
2
1
brain
29
16
18
2
3
1
1
1
lung
33
17
16
1
muscle of arm
33
16
16
1
kidney
29
14
15
1
2
1
1
1
small intestine
29
17
15
1
1
adrenal gland
28
17
14
1
1
placenta
26
15
14
1
2
1
1
muscle of leg
27
14
15
1
large intestine
27
14
13
1
1
muscle of back
28
13
13
left lung
26
13
13
thymus
20
14
11
1
1
1
liver
13
10
9
7
2
2
1
1
right lung
22
11
11
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
1
1
left kidney
18
9
9
spleen
15
8
6
1
1
1
spinal cord
14
8
7
1
1
heart left ventricle
11
7
8
1
1
2
islet of Langerhans
1
3
13
1
2
1
2
2
2
2
adipose tissue
7
8
6
4
1
1
1
sigmoid colon
10
7
5
1
retina
6
3
3
1
7
1
1
ovary
8
6
4
1
1
psoas muscle
7
8
4
1
pancreas
5
5
3
1
1
2
1
1
thyroid gland
8
5
4
1
1
transverse colon
8
5
4
1
1
body of pancreas
8
5
4
1
gastrocnemius medialis
8
5
4
1
heart right ventricle
6
5
5
1
muscle of trunk
8
5
4
testis
7
3
3
1
1
1
1
tibial nerve
6
3
4
1
1
2
caudate nucleus
5
3
4
1
1
1
1
chorionic villus
8
4
4
layer of hippocampus
6
3
4
1
1
1
upper lobe of left lung
7
3
3
1
1
1
endocrine pancreas
7
4
4
skeletal muscle tissue
6
3
3
2
1
Peyer's patch
7
3
3
1
prostate gland
4
2
2
1
2
1
2
substantia nigra
5
2
3
2
1
temporal lobe
5
2
5
1
aorta
4
4
4
coronary artery
3
3
2
1
2
1
tibial artery
3
2
3
1
1
2
breast epithelium
5
3
2
1
esophagus muscularis mucosa
5
2
2
1
1
esophagus squamous epithelium
6
2
2
1
left renal cortex interstitium
6
2
2
1
left renal pelvis
6
2
2
1
right atrium auricular region
3
2
2
1
1
2
right renal pelvis
6
2
2
1
trophoblast
4
3
2
1
1
angular gyrus
4
2
4
ascending aorta
4
2
3
1
chorion membrane
3
3
3
1
colonic mucosa
4
2
3
1
esophagus
4
3
2
1
left cardiac atrium
2
1
6
1
lower leg skin
6
2
2
omental fat pad
5
2
2
1
right renal cortex interstitium
5
2
2
1
thoracic aorta
4
2
3
1
cerebellum
3
2
2
1
1
cingulate gyrus
4
2
3
duodenal mucosa
4
2
3
eye
4
2
2
1
frontal cortex
2
2
2
1
1
1
mucosa of rectum
4
2
3
parathyroid adenoma
5
2
2
putamen
2
1
1
2
1
1
1
stomach smooth muscle
4
2
3
subcutaneous adipose tissue
2
1
5
1
tongue
4
2
2
1
vagina
4
2
2
1
limb
3
2
2
1
muscle layer of colon
4
2
2
muscle layer of duodenum
4
2
2
urinary bladder
3
2
2
1
uterus
3
2
1
1
1
gastroesophageal sphincter
5
1
1
globus pallidus
2
1
1
1
1
1
midbrain
1
1
1
1
1
1
1
pigmented layer of retina
7
right cardiac atrium
2
2
3
Ammon's horn
2
2
1
1
Brodmann (1909) area 46
2
2
2
occipital lobe
1
1
1
1
1
1
skin of body
1
1
1
3
subcutaneous abdominal adipose tissue
5
1
superior temporal gyrus
1
1
1
1
1
1
umbilical cord
2
1
1
1
1
cartilage tissue
2
1
2
germinal matrix
2
1
2
medulla oblongata
1
1
1
1
1
middle frontal gyrus
2
1
1
1
pons
1
1
1
1
1
amnion
2
1
1
cerebellar cortex
2
1
1
cortex of kidney
1
1
1
1
embryonic facial prominence
1
1
1
1
femur
2
1
1
inferior parietal cortex
1
1
1
1
mucosa of stomach
2
1
1
rectum smooth muscle tissue
1
1
2
right lobe of liver
2
1
1
arm bone
1
1
1
germinal center
1
1
1
leg bone
1
1
1
prefrontal cortex
1
1
1
suprapubic skin
3
muscle of leg
2
amygdala
1
1
blood
2
breast carcinoma
1
1
chorion
2
dorsolateral prefrontal cortex
1
1
endometrium cancer
1
1
first pancreatic bud
1
1
hypothalamus
1
1
kidney epithelium
1
1
mammary gland
1
1
middle frontal area 46
2
nucleus accumbens
1
1
pituitary gland
1
1
placental basal plate
2
respiratory system smooth muscle
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
tissue
2
hindlimb muscle
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
abdominal aorta artery
1
anterior cingulate cortex
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder (urinary bladder)
1
breast
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
esophagus mucosa
1
fallopian tube
1
forelimb muscle
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
minor salivary gland
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus of ventral thalamus
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
1
right arm bone
1
septal nuclear complex
1
skeletal muscle
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
synovial joint
1
temporal pole
1
thalamic complex
1
visceral abdominal adipose tissue
1
white adipose tissue
1
white matter
1
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