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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
197
accessible chromatin
89
histone modifications
37
variant allelic effects
36
binding sites
26
chromatin state
5
eQTL
2
caQTL
2
pQTL
2
variant to gene
1
sQTL
Date released
918
September, 2022
610
February, 2021
63
June, 2020
45
May, 2020
41
January, 2020
30
March, 2020
29
May, 2021
26
February, 2023
21
February, 2024
18
August, 2017
17
November, 2022
12
August, 2021
9
November, 2019
3
September, 2018
2
May, 2019
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1850
bed bed3+
486
bed bed9
212
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
1852
Homo sapiens
Biosample type
2125
cell line
1852
tissue
1606
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
226
kidney
224
musculature of body
208
brain
175
intestine
168
limb
142
heart
136
lung
101
large intestine
82
stomach
74
extraembryonic component
69
pancreas
63
eye
60
small intestine
54
epithelium
51
ureter
49
connective tissue
48
blood vessel
48
vasculature
46
adrenal gland
45
adipose tissue
45
placenta
37
thymus
35
liver
28
embryo
28
gonad
26
spleen
24
artery
24
esophagus
23
spinal cord
17
skin of body
15
bone element
15
ovary
15
skeleton
14
nerve
14
thyroid gland
13
lymphoid tissue
13
testis
11
prostate gland
9
breast
9
uterus
7
mouth
7
tongue
7
urinary bladder
6
vagina
2
mammary gland
2
penis
1
bodily fluid
1
pituitary gland
Project
1851
AMP
1
ITG
Genome assembly (visualization)
1851
hg19
97
GRCh38
BIOSAMPLE
TYPE
1852 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
variant allelic effects
binding sites
chromatin state
eQTL
caQTL
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
2
1
stomach
40
21
3
1
kidney
29
14
10
2
1
1
1
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
lung
33
17
small intestine
29
17
1
adrenal gland
28
17
1
placenta
26
15
1
2
1
large intestine
27
14
1
1
muscle of leg
27
14
2
muscle of back
28
13
left lung
26
13
thymus
20
14
1
1
1
retina
6
3
23
1
1
1
right lung
22
11
1
liver
13
10
4
2
1
1
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
right kidney
20
10
1
left kidney
18
9
spleen
15
8
2
1
heart left ventricle
11
7
3
1
2
spinal cord
14
8
1
adipose tissue
7
8
2
1
1
1
pigmented layer of retina
20
pancreas
5
5
5
1
1
1
1
sigmoid colon
10
7
1
islet of Langerhans
1
6
1
1
2
3
1
1
psoas muscle
7
8
1
ovary
8
6
1
body of pancreas
8
5
1
gastrocnemius medialis
8
5
1
thyroid gland
8
5
1
tibial nerve
6
3
3
2
transverse colon
8
5
1
coronary artery
3
3
3
2
1
1
heart right ventricle
6
5
1
1
muscle of trunk
8
5
testis
7
3
1
1
1
upper lobe of left lung
7
3
1
1
1
caudate nucleus
5
3
2
1
1
chorionic villus
8
4
layer of hippocampus
6
3
1
1
1
Peyer's patch
7
3
1
endocrine pancreas
7
4
prostate gland
4
2
1
2
2
left cardiac atrium
2
1
1
1
5
left renal pelvis
6
2
1
1
right atrium auricular region
3
2
3
2
right renal pelvis
6
2
1
1
skeletal muscle tissue
6
3
1
tibial artery
3
2
3
2
breast epithelium
5
3
1
esophagus squamous epithelium
6
2
1
left renal cortex interstitium
6
2
1
omental fat pad
5
2
2
substantia nigra
5
2
1
1
temporal lobe
5
2
1
1
trophoblast
4
3
1
1
aorta
4
4
ascending aorta
4
2
1
1
colonic mucosa
4
2
1
1
esophagus muscularis mucosa
5
2
1
lower leg skin
6
2
right renal cortex interstitium
5
2
1
thoracic aorta
4
2
1
1
cerebellum
3
2
1
1
chorion membrane
3
3
1
cingulate gyrus
4
2
1
duodenal mucosa
4
2
1
esophagus
4
3
eye
4
2
1
frontal cortex
2
2
2
1
mucosa of rectum
4
2
1
parathyroid adenoma
5
2
stomach smooth muscle
4
2
1
subcutaneous adipose tissue
2
2
1
1
1
tongue
4
2
1
Ammon's horn
2
2
2
angular gyrus
4
2
gastroesophageal sphincter
5
1
globus pallidus
2
1
2
1
limb
3
2
1
midbrain
1
1
2
1
1
muscle layer of colon
4
2
muscle layer of duodenum
4
2
occipital lobe
1
1
2
1
1
putamen
2
1
2
1
subcutaneous abdominal adipose tissue
5
1
urinary bladder
3
2
1
uterus
3
2
1
vagina
4
2
superior temporal gyrus
1
1
2
1
umbilical cord
2
1
1
1
Brodmann (1909) area 46
2
2
cerebellar cortex
2
1
1
medulla oblongata
1
1
2
middle frontal gyrus
2
1
1
pons
1
1
2
right cardiac atrium
2
2
amnion
2
1
cortex of kidney
1
1
1
embryonic facial prominence
1
1
1
femur
2
1
germinal matrix
2
1
inferior parietal cortex
1
1
1
mucosa of stomach
2
1
prefrontal cortex
1
1
1
rectum smooth muscle tissue
1
1
1
right lobe of liver
2
1
suprapubic skin
3
hindlimb muscle
1
1
muscle of leg
2
arm bone
1
1
breast carcinoma
1
1
cartilage tissue
1
1
chorion
2
endometrium cancer
1
1
first pancreatic bud
1
1
forelimb muscle
1
1
germinal center
1
1
kidney epithelium
1
1
leg bone
1
1
mammary gland
1
1
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
1
1
skin of body
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
tissue
2
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Schwann cell
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder (urinary bladder)
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
right arm bone
1
septal nuclear complex
1
skeletal muscle
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
temporal pole
1
thalamic complex
1
tissue-resident macrophage
1
type B pancreatic cell
1
white adipose tissue
1
white matter
1
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