Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
candidate regulatory elements
89
histone modifications
78
accessible chromatin
37
gene expression
35
binding sites
29
eQTL
3
pQTL
1
sQTL
Date released
1377
September, 2022
641
February, 2021
104
March, 2020
63
June, 2020
62
January, 2020
60
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
28
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
685
bed bed3+
37
tsv
15
bigWig
Organism
750
Homo sapiens
Biosample type
1465
cell line
750
tissue
551
primary cell
241
in vitro differentiated cells
Organ
98
kidney
96
brain
82
musculature of body
63
intestine
60
limb
49
lung
46
heart
36
connective tissue
36
large intestine
32
pancreas
32
stomach
27
adipose tissue
27
extraembryonic component
19
small intestine
19
ureter
17
liver
16
epithelium
16
placenta
15
adrenal gland
13
bone element
13
embryo
12
blood vessel
12
gonad
12
thymus
12
vasculature
11
esophagus
11
skin of body
11
spleen
10
eye
9
skeleton
8
spinal cord
7
prostate gland
7
testis
6
uterus
5
lymphoid tissue
5
ovary
5
thyroid gland
4
artery
4
breast
4
nerve
3
bodily fluid
3
mouth
3
tongue
2
blood
2
mammary gland
2
penis
2
urinary bladder
2
vagina
1
pituitary gland
Project
745
AMP
5
ITG
Genome assembly (visualization)
710
hg19
15
GRCh38
3
hg18
BIOSAMPLE
TYPE
750 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
gene expression
binding sites
eQTL
pQTL
sQTL
tissue
kidney
15
2
8
7
1
1
stomach
21
1
3
heart
18
1
2
2
1
brain
13
3
1
1
islet of Langerhans
1
1
6
1
8
1
lung
17
muscle of arm
17
large intestine
14
1
1
liver
6
2
1
1
6
placenta
12
2
1
1
adrenal gland
14
1
muscle of back
15
muscle of leg
14
1
small intestine
14
1
left lung
13
right lung
11
1
thymus
9
1
1
1
renal cortex interstitium
11
renal pelvis
10
1
spleen
9
1
1
right kidney
10
left kidney
9
subcutaneous adipose tissue
2
3
4
spinal cord
7
1
adipose tissue
1
3
1
2
heart left ventricle
6
1
pancreas
3
1
2
1
prostate gland
2
2
1
2
testis
4
1
1
1
upper lobe of left lung
4
1
1
1
retina
3
1
1
1
sigmoid colon
5
1
skeletal muscle tissue
3
1
2
Peyer's patch
4
1
cartilage tissue
1
2
2
esophagus squamous epithelium
4
1
gastrocnemius medialis
4
1
layer of hippocampus
3
1
1
ovary
4
1
subcutaneous abdominal adipose tissue
5
thyroid gland
4
1
transverse colon
4
1
body of pancreas
4
bone tissue
4
breast epithelium
3
1
caudate nucleus
2
1
1
chorionic villus
4
esophagus muscularis mucosa
3
1
gastroesophageal sphincter
4
heart right ventricle
3
1
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
omental fat pad
3
1
psoas muscle
3
1
right renal pelvis
4
substantia nigra
3
1
temporal lobe
3
1
tibial nerve
3
1
trophoblast
2
1
1
aorta
2
1
ascending aorta
2
1
colonic mucosa
2
1
cortex of kidney
1
1
1
endocrine pancreas
3
eye
2
1
globus pallidus
1
1
1
midbrain
1
1
1
parathyroid adenoma
3
prefrontal cortex
1
1
1
putamen
1
1
1
right renal cortex interstitium
3
suprapubic skin
3
tongue
2
1
umbilical cord
1
1
1
uterus
2
1
Ammon's horn
1
1
angular gyrus
2
blood
2
breast carcinoma
1
1
cerebellum
1
1
chorion
2
cingulate gyrus
2
duodenal mucosa
2
endometrium cancer
1
1
esophagus
2
first pancreatic bud
1
1
kidney epithelium
1
1
left cardiac atrium
1
1
limb
1
1
mammary gland
1
1
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
1
1
placental basal plate
2
respiratory system smooth muscle
1
1
right atrium auricular region
1
1
right cardiac atrium
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
stomach smooth muscle
2
superior temporal gyrus
1
1
thoracic aorta
2
tibial artery
1
1
urinary bladder
1
1
vagina
2
visceral abdominal adipose tissue
2
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
amnion
1
amygdala
1
anterior parahippocampal gyrus
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellar cortex
1
cerebrospinal fluid
1
chorion membrane
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
coronary artery
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
embryonic facial prominence
1
endometrium
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
femur
1
forelimb muscle
1
frontal cortex
1
frontal pole
1
germinal matrix
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
inferior parietal cortex
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
middle frontal gyrus
1
mitral valve
1
morula
1
mucosa of stomach
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pons
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
right arm bone
1
right lobe of liver
1
septal nuclear complex
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
synovial joint
1
temporal pole
1
thalamic complex
1
tricuspid valve
1
white matter
1
See all biosamples
Download