Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
44
target gene predictions
35
chromatin state
18
binding sites
13
accessible chromatin
13
histone modifications
3
eQTL
1
variant allelic effects
Date released
102
September, 2022
68
February, 2021
10
November, 2021
8
June, 2020
5
May, 2021
4
October, 2022
3
January, 2022
1
August, 2017
1
February, 2024
Available data
165
bed bed3+
34
bed bed9
5
bigWig
tsv
Organism
202
Homo sapiens
Biosample type
100
primary cell
70
cell line
23
tissue
9
in vitro differentiated cells
Organ
622
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
198
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
127
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
192
AMP
10
ENCODE
Genome assembly (visualization)
199
hg19
47
GRCh38
files.file_type!
bam
tsv
BIOSAMPLE
TYPE
202 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
iPS DF 19.7
2
1
1
+ See 15 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
skin of forearm
1
1
skin of prepuce of penis
1
1
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download