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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
211
accessible chromatin
128
target gene predictions
109
candidate regulatory elements
58
chromatin state
43
binding sites
41
variant allelic effects
29
histone modifications
19
gene expression
3
eQTL
2
caQTL
2
differential activity
Date released
163
September, 2022
127
November, 2021
116
February, 2021
62
February, 2024
27
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
August, 2021
11
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
November, 2019
Available data
565
bed bed3+
tsv
176
bigWig
78
txt
55
bed bed9
14
bigBed narrowPeak
6
csv
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
645
Homo sapiens
Biosample type
511
primary cell
76
tissue
40
cell line
18
in vitro differentiated cells
Organ
622
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
198
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
127
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
489
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
620
hg19
231
GRCh38
files.file_type!
bam
tsv
BIOSAMPLE
TYPE
645 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
3
1
1
1
2
4
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 94 more…
tissue
pigmented layer of retina
20
Peyer's patch
1
3
7
3
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
germinal center
1
1
1
+ See 15 more…
cell line
EndoC_BH1
8
1
1
2
GM18507
1
2
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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