Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
candidate regulatory elements
45
target gene predictions
41
chromatin state
15
accessible chromatin
12
binding sites
4
histone modifications
3
variant allelic effects
1
eQTL
Date released
120
September, 2022
63
February, 2021
10
June, 2020
4
November, 2021
3
January, 2020
3
May, 2020
2
May, 2021
2
October, 2022
1
August, 2017
1
January, 2022
1
March, 2020
Available data
169
bed bed3+
40
bed bed9
5
bigWig
Organism
210
Homo sapiens
Biosample type
144
tissue
62
cell line
4
primary cell
Organ
946
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
206
AMP
4
ENCODE
Genome assembly (visualization)
209
hg19
48
GRCh38
files.file_type!
bam
BIOSAMPLE
TYPE
210 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
tissue
small intestine
29
17
15
1
1
renal pelvis
19
9
9
2
1
left renal pelvis
6
2
2
1
1
right renal pelvis
6
2
2
1
1
duodenal mucosa
4
2
3
+ See 1 more…
cell line
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
MM.1S
2
2
1
1
1
1
GM10248
2
1
1
1
1
GM10266
2
1
1
1
1
+ See 10 more…
primary cell
enterocyte of epithelium of small intestine
1
1
small intestine goblet cell
1
1
See all biosamples
Download