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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
361
gene expression
191
chromatin state
152
differential activity
41
eQTL
5
variant allelic effects
3
sQTL
2
hQTL
1
accessible chromatin
1
meQTL
Date released
281
September, 2023
160
September, 2022
77
May, 2021
55
March, 2023
39
February, 2021
38
February, 2024
35
January, 2022
27
May, 2022
16
February, 2020
9
August, 2018
5
May, 2020
4
March, 2020
2
January, 2020
2
May, 2024
2
October, 2019
1
August, 2021
1
July, 2020
1
June, 2020
1
March, 2024
1
November, 2020
Available data
bed bed3+
591
tsv
bigWig
164
bed bed9
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
757
Homo sapiens
Biosample type
800
tissue
757
primary cell
227
cell line
123
in vitro differentiated cells
Organ
285
epithelium
170
kidney
68
connective tissue
59
vasculature
54
pancreas
39
blood vessel
17
skin of body
16
liver
9
artery
9
musculature of body
8
extraembryonic component
7
heart
7
lymphatic vessel
7
mammary gland
6
penis
5
vein
4
brain
4
embryo
4
lung
3
eye
2
bone element
2
bone marrow
2
bronchus
2
prostate gland
1
adipose tissue
1
esophagus
1
gonad
1
mouth
1
pericardium
1
placenta
1
spinal cord
1
testis
Project
474
AMP
281
KPMP
2
community
Genome assembly (visualization)
212
hg19
199
GRCh38
files.file_type!
bed bed3+
bigWig
txt
BIOSAMPLE
TYPE
757 results
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table-tab-icon
Clear Filters
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
sQTL
hQTL
accessible chromatin
meQTL
primary cell
monocyte
15
4
1
1
common myeloid progenitor, CD34-positive
13
regulatory T cell
7
3
2
T-helper 1 cell
7
3
1
B cell
2
8
T-helper 17 cell
6
3
1
CD4-positive, alpha-beta memory T cell
9
hepatocyte
8
1
macrophage
1
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
3
3
1
mature neutrophil
7
T cell
4
2
endothelial cell
6
mononuclear cell
6
neutrophil
2
2
1
1
pancreatic acinar cell
3
3
pancreatic alpha cell
3
3
pancreatic beta cell
3
3
pancreatic delta cell
3
3
pancreatic ductal cell
3
3
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
Afferent / Efferent Arteriole Endothelial Cell
3
2
B Cell
3
2
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
3
2
Connecting Tubule Cell
3
2
Connecting Tubule Intercalated Cell Type A
3
2
Connecting Tubule Principal Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Cycling Endothelial Cell
3
2
Cycling Epithelial Cell
3
2
Cycling T Cell
3
2
Cytotoxic T Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Peritubular Capillary Endothelial Cell
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Degenerative Vascular Smooth Muscle Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Fibroblast
3
2
Glomerular Capillary Endothelial Cell
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
Lymphatic Endothelial Cell
3
2
M2 Macrophage
3
2
Medullary Thick Ascending Limb Cell
3
2
Mesangial Cell
3
2
Monocyte
3
2
Monocyte-derived Cell
3
2
Myofibroblast
3
2
Natural Killer T Cell
3
2
Natural Killer T Cell Type 1
3
2
Natural Killer T Cell Type 2
3
2
Non-Classical Monocyte
3
2
Parietal Epithelial Cell
3
2
Peritubular Capillary Endothelial Cell
3
2
Plasma Cell
3
2
Plasmacytoid Dendritic Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Regulatory T Cell
3
2
Renin-positive Juxtaglomerular Granular Cell
3
2
T Cell
3
2
Transitional Principal-Intercalated Cell
3
2
Vascular Smooth Muscle Cell / Pericyte
3
2
endothelial cell of umbilical vein
4
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
2
1
1
natural killer cell
1
3
1
pancreatic stellate cell
2
3
CD14-positive monocyte
4
alternatively activated macrophage
4
foreskin keratinocyte
4
gamma-delta T cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
3
1
nephron progenitor
4
pancreatic MUC5B+ductal cell
1
3
pancreatic alpha+beta cell
1
3
pancreatic cycling alpha cell
1
3
pancreatic endothelial cell
1
3
pancreatic gamma+epsilon cell
1
3
pancreatic macrophage cell
1
3
pancreatic mast cell
1
3
skeletal muscle myoblast
1
2
1
skeletal muscle satellite cell
2
2
trophoblast cell
4
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
2
1
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
T follicular helper cell
2
1
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
glomerular endothelial cell
1
1
1
glomerular visceral epithelial cell
2
1
hepatic stellate cell
1
1
1
inflammatory macrophage
3
kidney glomerular epithelial cell
1
1
1
kidney interstitial cell
3
kidney tubule cell
1
2
mammary gland epithelial cell
3
memory B cell
3
naive B cel
2
1
naive T cell
3
neurosphere
3
osteoblast
2
1
pancreatic quiescent stellate cell
3
Kupffer cell
2
articular chondrocyte
2
astrocyte
1
1
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
1
1
erythroblast
2
fibroblast
2
fibroblast of breast
2
keratinocyte
2
kidney capillary endothelial cell
1
1
kidney epithelial cell
1
1
leukocyte
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
1
1
myoepithelial cell of mammary gland
2
pancreatic polypeptide-secreting cell
2
renal cortical epithelial cell
1
1
renal vesicle
2
skeletal muscle fiber
2
skin fibroblast
2
B-1a B cell
1
CD1c-positive myeloid dendritic cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
adipocyte
1
alpha-beta T cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
cytotoxic T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of distal tubule
1
epithelial cell of esophagus
1
erythroid lineage cell
1
fat cell
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foreskin melanocyte
1
glial cell
1
helper T cell
1
iris pigment epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary stem cell
1
mast cell
1
mature B cell
1
mature eosinophil
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
microglial cell
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
neural cell
1
non-pigmented ciliary epithelial cell
1
pancreatic cell
1
pancreatic epsilon cell
1
pericardium fibroblast
1
pericyte cell
1
plasma cell
1
progenitor cell
1
proximal tubule
1
pulmonary artery endothelial cell
1
quiescent pancreatic stellate cell
1
regular cardiac myocyte
1
renal connecting tubule
1
retinal pigment epithelial cell
1
sensory neuron
1
skeletal muscle cell
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
stromal cell of bone marrow
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
1
See all biosamples
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