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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
913
accessible chromatin
817
binding sites
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
1672
September, 2022
1572
February, 2021
333
November, 2021
311
February, 2024
289
June, 2020
182
May, 2021
152
May, 2020
106
January, 2022
101
October, 2022
66
January, 2020
62
August, 2021
56
January, 2021
49
March, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4947
bed bed3+
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5158
Homo sapiens
Biosample type
1865
tissue
1567
cell line
1506
primary cell
261
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
329
connective tissue
318
kidney
285
brain
283
musculature of body
236
lung
223
intestine
182
pancreas
175
limb
174
heart
167
bodily fluid
167
embryo
162
vasculature
159
blood
155
skin of body
134
large intestine
124
blood vessel
108
extraembryonic component
100
liver
94
eye
93
stomach
75
uterus
68
mammary gland
65
bone element
65
small intestine
58
adipose tissue
58
adrenal gland
57
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
46
artery
39
gonad
37
thymus
36
esophagus
30
spinal cord
27
spleen
20
testis
18
ovary
18
thyroid gland
17
lymphoid tissue
17
vein
15
nerve
15
skeleton
14
mouth
13
bronchus
13
lymphatic vessel
11
pituitary gland
10
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
3
nose
3
trachea
1
pericardium
Project
4779
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5023
hg19
796
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
annotation_type!
histone modifications
BIOSAMPLE
TYPE
5205 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
tissue
heart
37
20
5
1
2
stomach
40
21
3
1
kidney
29
14
10
1
1
1
brain
29
16
2
1
2
1
lung
33
17
1
+ See 190 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
HFFc6
19
+ See 641 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
2
1
2
1
2
fibroblast
4
16
1
2
6
monocyte
2
18
1
4
2
1
1
+ See 322 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
1
4
embryonic stem cell
1
6
1
mesenchymal stem cell
3
3
1
1
+ See 82 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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