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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
accessible chromatin
9
binding sites
4
histone modifications
1
chromatin state
1
eQTL
1
gene expression
1
variant allelic effects
Date released
140
September, 2022
70
February, 2021
4
May, 2021
4
October, 2022
3
November, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
224
bed bed3+
bed bed9
1
tsv
Organism
226
Homo sapiens
Biosample type
136
tissue
69
cell line
21
primary cell
Organ
687
epithelium
525
kidney
358
brain
331
connective tissue
277
musculature of body
226
lung
213
intestine
199
pancreas
198
vasculature
183
heart
181
bodily fluid
176
embryo
174
limb
172
blood
157
skin of body
151
blood vessel
131
large intestine
118
liver
104
extraembryonic component
88
stomach
76
uterus
74
adipose tissue
66
mammary gland
62
small intestine
60
bone element
60
prostate gland
56
artery
53
placenta
52
adrenal gland
51
penis
47
ureter
46
lymph node
41
eye
37
gonad
36
thymus
34
esophagus
33
spinal cord
26
spleen
20
testis
18
nerve
17
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
lymphatic vessel
14
mouth
13
pituitary gland
11
bronchus
10
bone marrow
10
breast
8
vagina
7
skeleton
7
tongue
7
urinary bladder
4
trachea
2
nose
1
pericardium
Project
223
AMP
3
ENCODE
Genome assembly (visualization)
224
hg19
4
GRCh38
files.file_type!
bed bed9
annotation_type!
representative DNase hypersensitivity sites
accessible chromatin
BIOSAMPLE
TYPE
226 results
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candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
1
1
left lung
26
13
right lung
22
11
upper lobe of left lung
7
3
1
1
cell line
A549
21
19
2
1
IMR-90
2
2
2
1
PC-9
2
2
1
1
WI38
5
1
NCI-H460 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
2
1
lung microvascular endothelial cell
3
1
type II pneumocyte
2
1
type I pneumocyte
1
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