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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
679
binding sites
673
histone modifications
360
accessible chromatin
131
gene expression
125
eQTL
74
Fine-mapped variants
53
variant allelic effects
38
chromatin state
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1945
February, 2021
1281
September, 2022
215
June, 2020
194
February, 2024
113
March, 2020
94
May, 2021
70
October, 2022
66
January, 2022
59
January, 2020
59
May, 2020
55
August, 2021
48
February, 2020
29
March, 2024
28
February, 2023
25
August, 2017
17
November, 2022
15
March, 2023
11
November, 2019
9
May, 2022
3
September, 2018
2
January, 2018
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3981
bed bed3+
bed bed9
234
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4342
Homo sapiens
Biosample type
primary cell
2173
cell line
2166
tissue
in vitro differentiated cells
4
stem cell
Organ
365
brain
274
kidney
255
musculature of body
211
intestine
211
lung
193
limb
184
bodily fluid
180
heart
175
blood
146
embryo
135
large intestine
135
pancreas
116
connective tissue
99
epithelium
85
stomach
79
adipose tissue
79
vasculature
78
skin of body
77
extraembryonic component
75
liver
74
blood vessel
74
eye
74
uterus
62
bone element
61
small intestine
57
prostate gland
54
lymph node
51
ureter
48
adrenal gland
48
placenta
40
artery
38
gonad
37
thymus
32
spinal cord
31
mammary gland
29
esophagus
28
spleen
21
nerve
21
testis
19
lymphoid tissue
17
ovary
16
thyroid gland
15
skeleton
13
penis
13
pituitary gland
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
3
vein
2
lymphatic vessel
Project
4330
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4109
hg19
434
GRCh38
4
hg18
files.file_type!
bed bed9
biosample_type!
primary cell
in vitro differentiated cells
BIOSAMPLE
TYPE
4345 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
chromatin state
differential activity
variant to gene
pQTL
caQTL
other
sQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
2
1
1
8
A549
21
19
2
1
1
K562
7
23
2
1
1
1
EndoC_BH1
1
1
1
8
8
1
3
+ See 765 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
1
2
10
7
1
1
brain
29
16
1
3
2
1
2
1
lung
33
17
1
1
+ See 261 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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