Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
477
accessible chromatin
346
target gene predictions
290
candidate regulatory elements
206
histone modifications
152
differential activity
94
binding sites
80
variant allelic effects
44
eQTL
32
chromatin state
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
428
February, 2021
323
November, 2021
293
September, 2022
281
September, 2023
252
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
28
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
5
August, 2017
5
March, 2020
5
October, 2019
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1512
bed bed3+
589
tsv
405
bigWig
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2177
Homo sapiens
Biosample type
2222
primary cell
2144
tissue
2117
cell line
421
in vitro differentiated cells
4
stem cell
Organ
775
epithelium
300
kidney
255
connective tissue
153
vasculature
126
pancreas
103
blood vessel
skin of body
61
liver
47
musculature of body
39
mammary gland
35
penis
32
extraembryonic component
31
brain
30
lung
28
heart
27
artery
23
intestine
20
eye
18
embryo
16
vein
15
lymphatic vessel
14
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1540
AMP
323
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1556
hg19
533
GRCh38
files.file_type!
bed bed9
organ_slims!
skin of body
BIOSAMPLE
TYPE
2222 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
common myeloid progenitor, CD34-positive
14
27
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
6
10
14
+ See 435 more…
See all biosamples
Download