Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
accessible chromatin
30
differential activity
24
gene expression
24
target gene predictions
7
variant allelic effects
3
histone modifications
1
binding sites
Date released
39
March, 2023
20
January, 2021
18
November, 2021
12
February, 2024
12
May, 2021
7
August, 2018
7
February, 2021
5
October, 2019
4
September, 2022
1
June, 2020
1
June, 2021
Available data
70
bed bed3+
47
tsv
40
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
126
Homo sapiens
Biosample type
126
primary cell
104
tissue
31
cell line
3
in vitro differentiated cells
Organ
775
epithelium
300
kidney
255
connective tissue
153
vasculature
126
pancreas
103
blood vessel
83
skin of body
61
liver
47
musculature of body
39
mammary gland
35
penis
32
extraembryonic component
31
brain
30
lung
28
heart
27
artery
23
intestine
20
eye
18
embryo
16
vein
15
lymphatic vessel
14
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
88
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
72
hg19
23
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
126 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
target gene predictions
variant allelic effects
histone modifications
binding sites
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
+ See 12 more…
See all biosamples
Download