Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
856
candidate regulatory elements
471
target gene predictions
174
accessible chromatin
92
gene expression
86
eQTL
46
histone modifications
38
Fine-mapped variants
38
variant allelic effects
31
binding sites
19
chromatin state
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
828
September, 2022
556
February, 2021
66
March, 2020
52
June, 2020
46
August, 2021
45
May, 2020
39
January, 2022
38
January, 2020
31
May, 2021
30
February, 2020
27
March, 2024
26
February, 2023
26
February, 2024
17
November, 2022
13
August, 2017
9
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1642
bed bed3+
bed bed9
146
tsv
108
bigWig
25
bigBed bed9
1
bam
Organism
1867
Homo sapiens
Biosample type
2276
primary cell
2107
cell line
1868
tissue
426
in vitro differentiated cells
3
stem cell
Organ
brain
241
musculature of body
240
kidney
187
limb
181
intestine
171
heart
138
lung
105
large intestine
104
pancreas
87
connective tissue
85
stomach
76
adipose tissue
75
extraembryonic component
68
blood vessel
68
vasculature
65
eye
61
small intestine
57
epithelium
51
ureter
50
liver
48
adrenal gland
46
placenta
37
thymus
36
artery
32
gonad
29
esophagus
29
spinal cord
28
embryo
28
spleen
22
skin of body
21
nerve
19
bone element
17
ovary
16
thyroid gland
15
skeleton
15
testis
14
lymphoid tissue
13
prostate gland
12
uterus
11
breast
9
mouth
8
tongue
8
urinary bladder
8
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
1863
AMP
5
ITG
Genome assembly (visualization)
1716
hg19
171
GRCh38
3
hg18
files.file_type!
bed bed9
organ_slims!
brain
BIOSAMPLE
TYPE
1868 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
chromatin state
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
5
3
1
2
1
stomach
40
21
3
1
1
1
kidney
29
14
10
7
1
2
1
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 200 more…
See all biosamples
Download