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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1344
candidate regulatory elements
958
target gene predictions
747
accessible chromatin
662
gene expression
393
histone modifications
174
binding sites
159
eQTL
157
differential activity
136
variant allelic effects
74
Fine-mapped variants
62
chromatin state
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1312
September, 2022
1286
February, 2021
333
November, 2021
321
May, 2021
286
September, 2023
210
February, 2024
150
May, 2020
137
June, 2020
121
March, 2020
119
August, 2021
96
January, 2022
82
January, 2020
64
February, 2020
61
March, 2023
56
January, 2021
44
November, 2022
42
May, 2022
31
February, 2023
31
October, 2022
29
August, 2017
29
March, 2024
19
April, 2020
12
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3798
bed bed3+
876
tsv
bed bed9
542
bigWig
108
txt
40
bigBed bed9
27
bed bed9+
24
csv
16
bigBed narrowPeak
bam
3
bed gappedPeak
3
xls
Organism
4855
Homo sapiens
Biosample type
2302
primary cell
cell line
2165
tissue
430
in vitro differentiated cells
4
stem cell
Organ
854
epithelium
541
kidney
389
connective tissue
334
brain
290
musculature of body
230
pancreas
223
vasculature
204
intestine
200
heart
188
limb
171
blood vessel
168
lung
116
liver
114
skin of body
111
extraembryonic component
111
large intestine
96
stomach
91
eye
78
adipose tissue
71
embryo
65
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
44
mammary gland
43
penis
38
esophagus
38
thymus
36
gonad
32
bone element
32
spinal cord
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
lymphatic vessel
17
uterus
17
vein
16
testis
15
skeleton
14
bronchus
14
lymphoid tissue
13
bodily fluid
12
blood
12
bone marrow
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
4205
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
3960
hg19
821
GRCh38
3
hg18
files.file_type!
bed bed9
bam
biosample_type!
cell line
BIOSAMPLE
TYPE
4903 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
18
15
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
4
3
30
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
9
1
2
1
2
2
B cell
14
10
6
2
+ See 448 more…
tissue
heart
37
20
5
3
1
1
2
stomach
40
21
3
1
1
1
kidney
29
14
10
7
2
1
1
1
brain
29
16
2
1
3
1
2
1
lung
33
17
1
1
+ See 261 more…
in vitro differentiated cells
neural progenitor cell
5
5
10
7
15
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
4
1
1
1
4
cardiomyocytes
11
embryonic stem cell
1
6
1
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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