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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
44
target gene predictions
18
binding sites
13
accessible chromatin
13
histone modifications
3
eQTL
2
gene expression
1
chromatin state
1
variant allelic effects
Date released
68
February, 2021
68
September, 2022
10
November, 2021
8
June, 2020
5
May, 2021
4
October, 2022
3
January, 2022
2
March, 2024
1
August, 2017
1
February, 2024
Available data
165
bed bed3+
bed bed9
5
bigWig
2
tsv
Organism
170
Homo sapiens
Biosample type
83
primary cell
56
cell line
22
tissue
9
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
74
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
160
AMP
10
ENCODE
Genome assembly (visualization)
165
hg19
13
GRCh38
files.file_type!
bed bed9
bed bed9+
BIOSAMPLE
TYPE
170 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
chromatin state
variant allelic effects
primary cell
foreskin fibroblast
6
2
4
1
2
foreskin keratinocyte
11
4
keratinocyte
3
5
1
2
2
1
1
fibroblast of dermis
4
4
1
dermis blood vessel endothelial cell
6
2
+ See 8 more…
cell line
GM23248
2
1
1
1
1
RPMI7951
2
1
1
SK-MEL-5
2
1
1
iPS DF 19.11
2
2
keratinocyte
3
1
+ See 15 more…
tissue
lower leg skin
6
2
skin of body
1
1
3
suprapubic skin
3
skin of forearm
1
1
skin of prepuce of penis
1
1
+ See 2 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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